Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0354 ATGAAGAATTGTGAGCTGTGCAAAGCTGTTGCGAGGACCTACTGCGAGTCCGACCAGGCTAGCTTGTGCTGGGAATGCGACGCTAAGGTGCACGGAGCCAACTTCTTGGTAACCAGACACTCCAGGACTCTTCTCTGCCATGCGTGTCAGTCTTTGACGCCATGGAAAGCCTCCGGTGCCAAGCTCGGAAACACCCTTTCTCTTTGCGAGAGCTGTGCCGGAGGAATGAAGGATATTGGTGAAGGAGACGAGAGCGAAAGTGGCAATGACGACGACATAGATACAGAGAACGATCTCGATGGCGGCGACGGCGGCGACGAAGAAGACGGCGGCTGCGGCAGCGAGGATGGAGATAATCAGGTAGTTCCCTTGTATGCCTCCACACCGCCTCCGCCGGCTTCAAACTCCTCGAGTAGTGAAGAGTCAATTAGCAGATGTAATAGCAGCGATAGATTTATTTCTGAAACGGCGAGCACAATATCCTTGAAACGAAAGCGTGGGGATGCATCGGATCTTAATCTACAGGATGGTTTGAAGTGGTGGTGTAAAAAAGATAGGGAAGGCGGAGAGCTAAAAAAGCAGGTGGCGTGGTTAGAATGTGAAGGCGGCGAAGGAACGTCGGAGGAATCTCCGGGAGGTAGGGAGATCGGAGCGGCGACCTTGAAGGGATCCAATGATGCCAAAACGCTGGAAGCCGTTTGA 702 0.5299 MKNCELCKAVARTYCESDQASLCWECDAKVHGANFLVTRHSRTLLCHACQSLTPWKASGAKLGNTLSLCESCAGGMKDIGEGDESESGNDDDIDTENDLDGGDGGDEEDGGCGSEDGDNQVVPLYASTPPPPASNSSSSEESISRCNSSDRFISETASTISLKRKRGDASDLNLQDGLKWWCKKDREGGELKKQVAWLECEGGEGTSEESPGGREIGAATLKGSNDAKTLEAV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0354 233 MobiDBLite consensus disorder prediction 131 150 - -
Lele12g0354 233 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Lele12g0354 233 SMART bboxneu5 1 45 IPR000315 GO:0008270
Lele12g0354 233 CDD Bbox1_BBX-like 4 45 - -
Lele12g0354 233 MobiDBLite consensus disorder prediction 84 114 - -
Lele12g0354 233 MobiDBLite consensus disorder prediction 202 233 - -
Lele12g0354 233 MobiDBLite consensus disorder prediction 80 150 - -
Lele12g0354 233 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 190 - -
Lele12g0354 233 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0354 Lele-ChrLele12 4679159 4679990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0354 2 105 C2C2-CO-like Transcription Factor Family AT5G54470 58.654 3.68e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele12g0354 zf-B_box 4.7e-06 No_clan