Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0339 ATGCTTAATGTTTACAGAGCAAAGAATCATGGTGATGCTGGTGATATGAATCATATTAGTACATTATTCATTCAGCTTGTGACACGGTTGGAAGAAAGTTCCAAGTCTCTGAATGGTAGAGATGCATCACTGAAGTTAGGGGAAAATGACTTACCATGCTTGTTTGGTTCCACTTCCTCAAAGTATAGGAAGAATAAATTGGTCCCTGAGAGGAAGTATAAGAGTAATGGAGCACGTGGCAGTTTAGATAATGGAGACTATGTCTCTGACCGAGAAATTAGGAGACGTTTATTAAAGTTGAACAAGAAATCTTTTGATTCAGATGGGGAAACATCTGATGACATTGATATTTCTTCTGAAGACGGCAAGAGTAACAATGAAGCTACAACATCTGGCAGTGAAAGTGACCAAGAAATCCATTCAGAAACTCAAATTGGGGAGTCAAGGGGGGATGGACTCTTCACACCAGATGAGGGTTTGGATTTCATAAGTGATGATCGTGAATGGGGTGCTCGTATGACTAAAGCAAGTTTAGTTCCTCCAGTTACCCGGAAATATGAAGTCATTGACCATTATGTCATTGTGGCTGATGAGGAGGATGTGCAGAGGAAGATGCGAGCCTCATTACCAGATGACTATGGAGAAAAACTGAATGCACAAAAAAATGGCACTGAGGAATCAGATATGGAACTGCCTGAAGTCAAGGACTACAAACCAAGAAAACAGCTTGGAGATGAAGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTATACGCACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGCCTCTACAGGAGAAGCATTTGTTTATAGAAGACATGCTCCTTCGAACTTTGAATAAGCAAGTTAGGCAATTTACTGGAACAGTAAGCACTCCAATGAGCTACCCTTTGCATCCTGTTATTGATGAAATTAAGAGGAGTGCTGAGGAGGACTCTGATGCAAGTATGGTTAGAATGTGTCAGGGTATCCTAAAAGCCATAGATAGTCGCCGGGATGACAAATATGTAGCTTATAGAAAGGGCCTTGGTGTTGTTTGCAACAAAGAAGAAGGATTTGGTGAAGAAGATTTTGTTGTGGAATTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGAATACGTTCTCTGCAGAAAAATAGTAAAGATCCAGCTCCTGAATTCTACAATATTTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGGCCTAATTGTGAAGCAAAAGTTACAGCTGTAGATGGTCATTATCAAATTGGAATTTATACTGTTCGTCAAATACAACATGGTGAGGAGATCACTTTTGATTATAATTCTGTCACAGAGAGCAAGGAGGAATATGAGGCTTCAGTGTGTTTGTGTGGAAGCCAAGTTTGTCGGGGGAGTTATTTGAATCTGACTGGTGAAGGCGCTTTCCAGAAGGTGCTGAAAGAGTGGCATGGAATTCTTGATCGTCATTGTTTGATGCTCGAAGCTTGTGAATTGAATTCTGTCTCTGAAGAGGATTATAATGATCTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGTGGCCTGCCCGATTGGCTAGTTGCATATGCAGCTCGCCTTGTACGTGTGAGATTCATCAATATTGAAAGAACTAAACTTCCTGAGGAAATTTTGAGGCATAATCTGGAAGAAAAAAGGAAATATTTTTCAGATATATGTCTTGAAGTTGAGAGAAGTGATGCAGAGGTTCAGGCTGAGGGTGTGTACAACCAAAGGCTACAGAATCTTGCTGTCACTCTTGATAAGGTAAGATATGTTATGAGATGTATTTTTGGGGATCCGCGGAAAGCACCACCTCCACTTGAAAGGCTCAGCCCTGAAGCAGCTGTTTCCTTCCTCTGGAAAGGAGAGGATTCATTTGTTGAGGAGCTTCTTCAGTGTATAGCTCCTCATGTTGAAGAAGATGCCTTGAATGATCTGAATGCCAAAATTCACTCTCATGATCCTTCAGGTTCTGGTGATATTCAAAATGAGCTTCAGAAATCTCTATTATGGTTGAGGGACGAGGTCAGAAATCTACCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATTCATATTTATGCTTATACCAATTGCTTCTTTAGAATACGGGATTATCAAGCTATTACTTCTCCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACGCTGACAAGTTGGGAACAGGATTTCAGGAGTATCTAAAGACATATGGTGAAAATTATTGTTTAGGGCAGCTAATTTTTTGGCATAACCAGAGTAATGCAAATCCAGATAGTAGCCTGGCCAGAGTTCGCAGGGGTTGCCTGTCATTGCCAGATGTGGGTTCCTTTTATGCTAAGGCTCAGAAGCCATCCCGTCATCGTGTTTACGGTCCTAGGACTGTCAGATCAATGCTGGCAAGAATGTACATGTTATTTGGGGTAGCCTGTATTTCTGTAAGATTGTTGATATTGGTTGAGGTGTGCTTACCTGTGCATGGTAAACTGACTTGTAGATATGTTATTGTGCTTTTGATTTTTGCTGGGGTGGTTGCTAATCATGTGCTGTTTATACAGGAGAAGCAGCCGCAGAGAGCCTGGCCCCAAGACAGGATATGGTCATTCCAAACTTCTCCGAAATTTTTTGGCAGCCCGATGTTAGATTCTGTTATGAATAACAATGCTCCACTGGACAGGGAAATGGTTCATTGGTTGAAGCACAGAAGAGCCGTATTCCATGCCATTTGGGAGAGATGA 2880 0.4149 MLNVYRAKNHGDAGDMNHISTLFIQLVTRLEESSKSLNGRDASLKLGENDLPCLFGSTSSKYRKNKLVPERKYKSNGARGSLDNGDYVSDREIRRRLLKLNKKSFDSDGETSDDIDISSEDGKSNNEATTSGSESDQEIHSETQIGESRGDGLFTPDEGLDFISDDREWGARMTKASLVPPVTRKYEVIDHYVIVADEEDVQRKMRASLPDDYGEKLNAQKNGTEESDMELPEVKDYKPRKQLGDEVIEQEVYGIDPYTHNLLLDSMPEELDWPLQEKHLFIEDMLLRTLNKQVRQFTGTVSTPMSYPLHPVIDEIKRSAEEDSDASMVRMCQGILKAIDSRRDDKYVAYRKGLGVVCNKEEGFGEEDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRQIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDRHCLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRVRFINIERTKLPEEILRHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLERLSPEAAVSFLWKGEDSFVEELLQCIAPHVEEDALNDLNAKIHSHDPSGSGDIQNELQKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTNCFFRIRDYQAITSPPVYISPLDLGPKYADKLGTGFQEYLKTYGENYCLGQLIFWHNQSNANPDSSLARVRRGCLSLPDVGSFYAKAQKPSRHRVYGPRTVRSMLARMYMLFGVACISVRLLILVEVCLPVHGKLTCRYVIVLLIFAGVVANHVLFIQEKQPQRAWPQDRIWSFQTSPKFFGSPMLDSVMNNNAPLDREMVHWLKHRRAVFHAIWER 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0339 959 ProSiteProfiles SET domain profile. 337 476 IPR001214 GO:0005515
Lele12g0339 959 MobiDBLite consensus disorder prediction 122 139 - -
Lele12g0339 959 Gene3D SET domain 337 507 IPR046341 -
Lele12g0339 959 SUPERFAMILY SET domain 351 499 IPR046341 -
Lele12g0339 959 Pfam Protein SET DOMAIN GROUP 2 C-terminal 897 959 IPR045606 -
Lele12g0339 959 Pfam Protein SET DOMAIN GROUP 2 C-terminal 487 850 IPR045606 -
Lele12g0339 959 CDD SET_SETD2-like 350 498 - -
Lele12g0339 959 Pfam SET domain 409 476 IPR001214 GO:0005515
Lele12g0339 959 MobiDBLite consensus disorder prediction 105 157 - -
Lele12g0339 959 MobiDBLite consensus disorder prediction 105 121 - -
Lele12g0339 959 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 4 959 - -
Lele12g0339 959 SMART set_7 342 482 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0339 Lele-ChrLele12 3572889 3579219 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele12g0339 SET 3.4e-12 No_clan