Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0338 ATGGATCATAACTTTGTTTCTCCCTATTCTGCCGCCGATGACGCCTCTTCATCATCCTTGGATCCATTGTTTTCCGGCTTCAGCCTTCAGTCCATTCTCAGCCTCCACCCCTCCGTCTTCTCTGACTACGCCGGCGGCAATGGCCTCCCCAGTCTCTCATTTTTATCCGATGATTCCCTGTCCCTGAATCTCCAGGGTGAAGCCAACCAGGGCTTCAGCACTTATGAGGACCACATTGCAGAGACAACAGAGAAGAAGCCGACTATCTTGCCCAAATCTGACTCAGGTCTCTTCGAGTTCGTTGCAAGCTCTGATAGCACTACTTCTTACCCCTTCGACTTCTTCTCCGGTCACTGCCCTCCCAGCTTCTACGATTCCTCAACCTTCAACCTTCTTCCTCAACTCCATTCCGTCGAGTCCTTTTCTCGCAAGCGTCCCCGCTTCGACTCTCTCATTTCCACTCCCAACACCGTGCCCGCGCCGCCGCAGCACAACCCTGATCCTTCCACCGTCTTCAGCAACAACCTCTTGGCCAACACAAAACCAGCCTCTTCTTCGCACGATGTTCCTCCCGTGGGTGAAAAATCATCTCCGGTGATTCCTCAAAGCAACCTGGCACGTCAGCGACGGCAGAAGCTGAGCGACAAGACTCGGTGCTTGCAGAAATTGATGCCGTGGGACAAGAAAATGGACCAAGCCACGCTGCTGGAGGAAGCGTACAAGTACGTCAAATTTCTGCAGGCGCAGTTCAATGTTCTCCAATCCATGCCCTCCTATTCGCCTTTCCTGTCCCACTCTGATGCTTCGCATTCCCAATCCTCCGTTCAAAAGGGCAAGGTGTTTGGGGATTTGGAGAGGCTGAATCGTAACCAGGTGTTGCAGGTGCTGGTGAACTCGCCCGTCGCCCAAACAAGGCTTTACTCCCAAGGCTTCTGTGTGTTCACCGTTGAACAGTTAACTTTGCTGAACAACATGACAGGGAAGAGGCTTCTTCTGCCGCAGATTATGTCCTATAACGCTTCTTCAAAATCCTTCTTTAAGTGA 1044 0.5201 MDHNFVSPYSAADDASSSSLDPLFSGFSLQSILSLHPSVFSDYAGGNGLPSLSFLSDDSLSLNLQGEANQGFSTYEDHIAETTEKKPTILPKSDSGLFEFVASSDSTTSYPFDFFSGHCPPSFYDSSTFNLLPQLHSVESFSRKRPRFDSLISTPNTVPAPPQHNPDPSTVFSNNLLANTKPASSSHDVPPVGEKSSPVIPQSNLARQRRQKLSDKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFNVLQSMPSYSPFLSHSDASHSQSSVQKGKVFGDLERLNRNQVLQVLVNSPVAQTRLYSQGFCVFTVEQLTLLNNMTGKRLLLPQIMSYNASSKSFFK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0338 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 258 IPR036638 GO:0046983
Lele12g0338 347 Pfam Helix-loop-helix DNA-binding domain 207 247 IPR011598 GO:0046983
Lele12g0338 347 MobiDBLite consensus disorder prediction 167 186 - -
Lele12g0338 347 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 177 324 IPR045843 GO:0003700|GO:0006355
Lele12g0338 347 SMART finulus 203 252 IPR011598 GO:0046983
Lele12g0338 347 MobiDBLite consensus disorder prediction 154 199 - -
Lele12g0338 347 Gene3D - 201 259 IPR036638 GO:0046983
Lele12g0338 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 246 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0338 Lele-ChrLele12 3570446 3571489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0338 209 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 43.220 1.10e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele12g0338 HLH 0.00029 No_clan