Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0331 ATGGACATCGACTCACGCACCTCCAATTGGCTCTGTGATTATGGCTTTGATGTTTCTGTTGCCGGAGCTGAATTCCCGGTCGTCCCTTCCGGCGGTTTCAACTGGGTATCTCCTACTTTCAACGGTTCTTCCGATACCAGCTTGGACCTGGAATACCCACTGGACAAGTCAACTTCCCTGGAAAATGGCCCTTCAAAGCGGTTGAGGACTGAATCATGTGCATCCGGCTCCAAGGCATGCCGTGAGAAACAACGAAGGGATAGACTGAATGAGAGGTTCCTGGAATTGAGTTCTATCTTGGAACCTGGTAAGCTGCCCAAGACAGATAAGACTGCTATATTAAGTGATGCAGTTCGAACGTTAACAGAACTACGAAGCGACGCCCAGAAGCTGAAAGAAACAAATGATGAATTGCTTGAAAAGATCAAGGAACTGAAGGCAGAGAAGAATGAGCTTCGTGCTGAGAAGAATAGGCTGAAGATGGATAAAGAAAAGCTGGAGCAACAGGTCAAAAGGATGAATGCACAGCCAACCTATCTTTCTCATCCTTCAGCTGCATTTACTGCTCAAGGCCAAACTGCAAGCCACAAGCTGATACCTTTTGTTGGCTATCCTGGAATTGGCATGTGGCAGTTTTTGCCACCTGCTGCTGTGGATACATCTCAGGATCATCTTCTTCGCCCTCCTGTCGCTTAA 696 0.4741 MDIDSRTSNWLCDYGFDVSVAGAEFPVVPSGGFNWVSPTFNGSSDTSLDLEYPLDKSTSLENGPSKRLRTESCASGSKACREKQRRDRLNERFLELSSILEPGKLPKTDKTAILSDAVRTLTELRSDAQKLKETNDELLEKIKELKAEKNELRAEKNRLKMDKEKLEQQVKRMNAQPTYLSHPSAAFTAQGQTASHKLIPFVGYPGIGMWQFLPPAAVDTSQDHLLRPPVA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0331 231 SMART finulus 79 130 IPR011598 GO:0046983
Lele12g0331 231 CDD bHLH_AtILR3_like 78 153 - -
Lele12g0331 231 Coils Coil 114 176 - -
Lele12g0331 231 PANTHER BHLH TRANSCRIPTION FACTOR 7 231 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lele12g0331 231 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 79 148 IPR036638 GO:0046983
Lele12g0331 231 Gene3D - 66 121 IPR036638 GO:0046983
Lele12g0331 231 Gene3D arf6 gtpase in complex with a specific effector, jip4 122 177 - -
Lele12g0331 231 Pfam Helix-loop-helix DNA-binding domain 77 124 IPR011598 GO:0046983
Lele12g0331 231 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 124 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0331 Lele-ChrLele12 3420749 3423562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0331 3 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 53.719 2.34e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele12g0331 HLH 5.9e-09 No_clan