Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0326 ATGGTGGAACGGAAGCAGTTCAAGACCAGGCTATGTGTACCATATCAGAAAGGCCGCTGTCCACGCCAAAATTGCACCTTTGCTCATGGGAATGCGGAGCTGCGGCGATTCTCGGGCTCATATAGTGATATTGGTAGCTTTTTAGATGTCCTTGGACTATTTCGTAATCCTGTTTCTTTGTCTGTTTGTATAATGGCTTCTGCACATGATTACATATCTATTGGATCATGTGACATGAAGCTTTATAAGGAGAGCATCCTGAGTTTTTCTCCTTTAATGACATGCCCATATGATTGGGAAAGTAGGCAAGACTCTTCAGATTACAGCCCTGGGAGTGATAGGAAGCGCAAGAGAGATAAGGGCTTTGCAGGCCAAAGTGATGTTTCTGGAAGCTTGAGATTCTCTGATAGAATCCAAGATAAAGAAGGAAAACTGTATTCCCCTAGTTCAAAAAATAGTCTTGAGGAGAAGCTGAAGAAAGTACACTCAGAAATCAACATGCTTGATCAGCAAAAGTTTCAACTTGGGGTTAGTGTTATTACTTACTGTAGCAGTTTCTCATTATCCACTAATTTTGATTGGCTTTTTCATAACGATATGGTGACTATAATTATGTGGATAAACTTTAAAGATAGGAAGAGATGTGTTGGATTTCCTTATGTTGGGAGATCACAGGCTCGACTCCAAAGGTTGGGAGATCAGCTTGACTCGGACATTGCTAGAATTGGTGTCAATGAAGAAGACTTGAGTATTGATATTTTGAAGGAAAGCAGGATTGGTGTGCCATTAACCAGTATGGCAGCTCATGTGGTTGATGAGGAAGTTGAGATTGAGCTTGATGATAACATTGAGAAAACTGAAACTGCACCTGCAGAAAATAAGAATGAAGTGGCATTTAAGGTGAGGAGTTTACCAATGCTTCCCCCAACTCTGACTTCTTCTGGAACGAATTATTCACAGTTTGAGGGTGATGATGAGAATGTGGATGTGGATGGGCTTGATGAAGAGGCAGAAATTGCACACATGGATATGGTCTAG 1038 0.4114 MVERKQFKTRLCVPYQKGRCPRQNCTFAHGNAELRRFSGSYSDIGSFLDVLGLFRNPVSLSVCIMASAHDYISIGSCDMKLYKESILSFSPLMTCPYDWESRQDSSDYSPGSDRKRKRDKGFAGQSDVSGSLRFSDRIQDKEGKLYSPSSKNSLEEKLKKVHSEINMLDQQKFQLGVSVITYCSSFSLSTNFDWLFHNDMVTIIMWINFKDRKRCVGFPYVGRSQARLQRLGDQLDSDIARIGVNEEDLSIDILKESRIGVPLTSMAAHVVDEEVEIELDDNIEKTETAPAENKNEVAFKVRSLPMLPPTLTSSGTNYSQFEGDDENVDVDGLDEEAEIAHMDMV 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0326 345 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Lele12g0326 345 Coils Coil 151 171 - -
Lele12g0326 345 Gene3D - 1 36 - -
Lele12g0326 345 MobiDBLite consensus disorder prediction 107 123 - -
Lele12g0326 345 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 256 333 IPR045868 GO:0046872
Lele12g0326 345 MobiDBLite consensus disorder prediction 101 129 - -
Lele12g0326 345 SUPERFAMILY CCCH zinc finger 4 35 IPR036855 GO:0046872
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele12g0326 Lele-ChrLele12 3037172 3042998 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele12g0326 None None None