Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0324 ATGGTGCTTAGAGTATTACTTGTAGAAGTGAATGATTCTACTCGTCAAGTTATCGCAACCCTTCTCAGTAAATGCAGTTACAAAGTTCCTGATGGGCTGAAGGCATGGGAGACACTGAAGCGGAGGGCTTCTAAAATAGATCTCATATTAACAGAAGTTGAGTTGCCATCAATATCGGGATTTGCACTTCTTACTTTGATCATGGAACATTATATGTGCAAGAAAATTCCTGTCATAAGTATATCGAATGGTGAGCTATCTTAA 264 0.3864 MVLRVLLVEVNDSTRQVIATLLSKCSYKVPDGLKAWETLKRRASKIDLILTEVELPSISGFALLTLIMEHYMCKKIPVISISNGELS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0324 87 SUPERFAMILY CheY-like 3 82 IPR011006 -
Lele12g0324 87 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 82 IPR045279 GO:0009736
Lele12g0324 87 Gene3D - 1 86 - -
Lele12g0324 87 ProSiteProfiles Response regulatory domain profile. 4 87 IPR001789 GO:0000160
Lele12g0324 87 Pfam Response regulator receiver domain 5 82 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0324 Lele-ChrLele12 3028355 3028767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0324 1 82 Response Regulator Gene Family AT5G24470 70.588 1.53e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele12g0324 Response_reg 1.9e-09 CL0304