Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0314 ATGCGGAGTGCGGGTCGGGTACCGGGAAACCGTATTGTTAATTTGGATTCTTTAAGAACGGAACGCTTTATGGCTGTGCCTCGAATAATTTGGGTTTGGATAATCCTTTGTGGTGGTCTTGCTTGTTGCCAGAGGCCAGCGTCTGTGAATATTGGTGCGGTTTTTACATTCGATTCTGTTATAGGTAGAGCTGCGAAGGTGGCAATGCAAATGGCTGTCGATGACGTCAATGCAGACCCCATAGTTCTTAACGAGACGAAACTGAACTTGCTAATGGAGGATGCCAGCTGTAACGTCTTCTTGGGATCAATTGGAGCGTTTCGTGCCCTTGAGCAAGGGGTTGCGGCCATAATTGGTCCACAATCATCTTCCATATCTCATGTGATTGCTCAAATTGCCAATGGTCTCCAAGTGCCTCAAGTTTCCTATGCTGCCACTGATCCAACTCTGTCGGCCCTCCAATTTCCTTTCTTTTTTCGTTCTATACCAAGTGATTCTGTGCAAATGACTGCAGTGGCTGATTTCATTGACTTCTATGGATGGAAAGAAGTCATTGCCGTCTTCTTGGATGATGATTATGGGAGAAATGGGATATCTGCTCTAGGTGATGAACTTGAGAAACGGAGGATAAGGATTTCTCACAAGTTGCCTATTAGCATTAAGTTTGATTTGAATGAAATCACTAACTTGCTCAATCATTCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCATGTCAACCCGGATCCTAGATTAAGAACTTTTAACATAGCCTATGAACTGAAAATGATGTCTAGTGACTTTGTCTGGCTTGTCACTGATTGGCTTTCTGCTACTCTAGATTCGTTCTCCCCACAGAATCACACATCTCTCACTGTTGTGCAAGGGGTGGTTGGATTTCGTCCATACATTCCAGATTCTTCCCAGAAAAGATCATTCATTTCTCGGTGGACAAAAATGCACAATGAAAGTGTGGCAAGCATCGGGTTAAACCATTATGGATTTTCTGCGTATGATTCTATTTGGGCTGTTGCGCATGCAATTGATAAGTTTATTGAAATACACGGGAATATTACATTCTCAGTCAACAATAACTCGAGGCTATTGAATAAAGAAGCAGCTGATATACGGCTTGACGAGCTCAAAGTCTTCACAGGTGGATCTGATCTAATCAACATATTATTGAAATCAAATTATACTGGTGTGAGTGGTCACCTTCAATTTAGTCCTGACAGAAATATTGTTAGGGGTGGCTATGAAGTTATCAATATCAATCAGATGGAAATTACCAGGGTTGGATATTGGTCTAATGATTTTGGACTTTCAGTGGCACCACCTGAAACTCTTAAGAAGAAAGGACGTGGTAGGGTTCCCCAAGATCAGAAGCTTAACGTTATCACTTGGCCAGGTGGAATGACAGGAAGACCGCGTGGCTGGGTGGTTGCTGATAATGCAAGACCACTGAGAATTGGAGTTCCCAAGAGAGCAAGTTTTGTTGAGTTTGTCACTGAGCTTCCTGGTAGTCATCAAATTCAAGGGTACTGCATTGATATTTTCAAGAAAGCTCTGGAGTTTGTACCATATGATGTTCCTTATGTATTTAAGACTTTCGGGAATGGCCAATCAAATCCCAATTATGACGCGCTTGTGAAGATGGTTGCTGACAATGAATTTGATGCTGTTGTTGGAGACATAGCAATTGTGACGAACCGTACAAGGATTGTGGATTTTTCTCAGCCTTTCGCATCAACCGGTCTTGTTATAGTGGCTCCAATCAAGAATTCAAAATCAAGTGCTTGGGTATTTCTCAAACCATTTACTGCAGATATGTGGTGTGTCACTGCAGCTTCATTTATAATGATTGGAGTAGTTATATGGATTCTTGAGCACCGAATCAATGATGATTTCCGCGGTCCTCCAAAGAGGCAACTCGTGACTATGTGTTTGTTCAGCCTCTCAACTCTGTTCAAGACAAATCAGGAAAATACAATAAGCTCGCTTAGTCGAATGGTGATGATAGTTTGGCTTTTTCTGTTGATGGTGATCACGGCTAGCTATACAGCAAGCTTGACGTCGATTCTTACAGTAGAGCAGCTTTCATCGCCCATCACCGGCATCGATAGCTTGATTGCAAGTAACTGGCCTATAGGGTACCAAGTAGGGTCATTTGCTTTCAACTATCTGACAGAGAGTCTTTATGTACAAAAATCAAGACTCGTCGCTCTAGGTAACCCCGAGGAATATGCAAGAGCTCTGCAGCTAGGGCCTTCTGGTGGAGGCGTGGGAGCTATAATCGATGAGCTTCCATACATAGAGTTATTTCTTTCAACACAAACTGATTTTGGTATTATTGGACAACAATTTACCAGAAGCAGTTGGGGATTTGCGTTTCAAAGAGAGTCTCCTCTGGCCCTTGATATGTCGACAGCAATTCTGAAACTCAGTGAGAACGGAGAGCTTCAGAAGATACGAGAGCGATGGTTCTGTAAAATGGGTTGTCCTGAAGAAAGAAGAAACAAGTCAGAACCTAACCAACTACACTTGATCAGCTTCTGGGGTCTATATCTCTCATGTGGTATCATCACACTTGCTTCTTTGCTCATATTTCTTCTGCGAACAATTCGCCAATACATGCGATACAAGCAAAGACAAAAAGATAATAATCCTTCTGGATCCCACGAAGCATCTGGTGGTAAATGTTCGCACGTTATCTATAGCTTCTTTAATTTCATTGATGAGAAAGAAGAAGCCATCAAGAAAATGTTCACTCACTGTGATGAGAATCCAGAACAACAGCAGCCAACCTGA 2808 0.4234 MRSAGRVPGNRIVNLDSLRTERFMAVPRIIWVWIILCGGLACCQRPASVNIGAVFTFDSVIGRAAKVAMQMAVDDVNADPIVLNETKLNLLMEDASCNVFLGSIGAFRALEQGVAAIIGPQSSSISHVIAQIANGLQVPQVSYAATDPTLSALQFPFFFRSIPSDSVQMTAVADFIDFYGWKEVIAVFLDDDYGRNGISALGDELEKRRIRISHKLPISIKFDLNEITNLLNHSKVFGPRVYVVHVNPDPRLRTFNIAYELKMMSSDFVWLVTDWLSATLDSFSPQNHTSLTVVQGVVGFRPYIPDSSQKRSFISRWTKMHNESVASIGLNHYGFSAYDSIWAVAHAIDKFIEIHGNITFSVNNNSRLLNKEAADIRLDELKVFTGGSDLINILLKSNYTGVSGHLQFSPDRNIVRGGYEVININQMEITRVGYWSNDFGLSVAPPETLKKKGRGRVPQDQKLNVITWPGGMTGRPRGWVVADNARPLRIGVPKRASFVEFVTELPGSHQIQGYCIDIFKKALEFVPYDVPYVFKTFGNGQSNPNYDALVKMVADNEFDAVVGDIAIVTNRTRIVDFSQPFASTGLVIVAPIKNSKSSAWVFLKPFTADMWCVTAASFIMIGVVIWILEHRINDDFRGPPKRQLVTMCLFSLSTLFKTNQENTISSLSRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAFNYLTESLYVQKSRLVALGNPEEYARALQLGPSGGGVGAIIDELPYIELFLSTQTDFGIIGQQFTRSSWGFAFQRESPLALDMSTAILKLSENGELQKIRERWFCKMGCPEERRNKSEPNQLHLISFWGLYLSCGIITLASLLIFLLRTIRQYMRYKQRQKDNNPSGSHEASGGKCSHVIYSFFNFIDEKEEAIKKMFTHCDENPEQQQPT 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0314 935 Gene3D - 599 733 - -
Lele12g0314 935 Gene3D - 791 828 - -
Lele12g0314 935 CDD GluR_Plant 486 828 - -
Lele12g0314 935 PIRSF IGluLR_plant 21 935 IPR017103 -
Lele12g0314 935 Pfam Bacterial extracellular solute-binding proteins, family 3 489 828 IPR001638 -
Lele12g0314 935 SMART GluR_14 487 830 IPR001320 GO:0015276|GO:0016020
Lele12g0314 935 Pfam Ligand-gated ion channel 829 859 IPR001320 GO:0015276|GO:0016020
Lele12g0314 935 Gene3D - 763 790 - -
Lele12g0314 935 SUPERFAMILY Periplasmic binding protein-like II 465 828 - -
Lele12g0314 935 Gene3D - 67 416 - -
Lele12g0314 935 CDD PBP1_GABAb_receptor_plant 50 445 IPR044440 -
Lele12g0314 935 FunFam Glutamate receptor 164 330 - -
Lele12g0314 935 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 49 890 - -
Lele12g0314 935 Pfam Receptor family ligand binding region 66 425 IPR001828 -
Lele12g0314 935 FunFam Glutamate receptor 725 832 - -
Lele12g0314 935 Gene3D - 484 598 - -
Lele12g0314 935 Gene3D - 164 441 - -
Lele12g0314 935 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 122 150 - -
Lele12g0314 935 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 62 78 - -
Lele12g0314 935 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 337 349 - -
Lele12g0314 935 FunFam Glutamate receptor 599 737 - -
Lele12g0314 935 SUPERFAMILY Periplasmic binding protein-like I 42 479 IPR028082 -
Lele12g0314 935 FunFam Glutamate receptor 483 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0314 Lele-ChrLele12 2939155 2943973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0314 43 928 Ion Channels AT2G32400 56.404 0.0 1020