Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0306 ATGGGTGGGGGACATCCGAAGTTGGAACGTCATTTCAGTCCCCCAGAAGAAACAATGACTTGGAAGAACAGAGGTGAGCAATCTTCCAGGAGCCTTGTGTCGCAGAAATGGGCTCTTTTTCTCTGTCTCGCAAGTTTCTGTGCCGGCATGCTCTTCACTAACAGGATGTGGACTATTCCCGAACCTAAAGGGCTTGCAAGAACAACAGCAATGGAAGCAGAAACATTGAATGTGGTTTCTGAGGGTTGTAATTCGAGAATTTTGCAAGAGAAGGAAGTGAAGCGTGACACTAACAATTTATATCAGGAAGTTTCCAAGTCTCATAATGGCATACAAACTTTGGATAAAACAATTTCAAACCTAGAGATGGAATTAGCTGCTGCTAGAGCAGCTCAGGAGTCTATAAGAAATGGTGCTCCTGTATCTGGAGAACATCTTAAGAGAGCTGAATTTGAATCACCTGCTAAGAGAAGGTACCTAATGGTCATAGGAATAAATACTGCTTTTAGCAGCAGGAAAAGAAGAGACTCAATTCGTGCCACCTGGATGCCACAAGGTGAAAAAAGAAGGAAGCTAGAGGAAGAGAAGGGCATTGTTGTCCGCTTTGTGATTGGTCACAGTGCTACTTCTGGGGGTATCCTAGACAGAGCTATTGAAGCAGAGGACAACAAGCATGGGGATTTCTTAAGACTGGACCATGTTGAGGGATACCTTCAATTGTCGGCAAAGACGAAGACATACTTTGCAACTGCTGTTAAATTATGGGATGCTGATTTCTATGTCAAAGTCGATGATGATGTTCATGTAAATATAGGAACACTAGGAGAAACTCTGGTTAGGCGCCGTCCAAAACCAAGGATATACGTTGGTTGCATGAAATCTGGCCCCGTCCTTTCTCAAAAAGGGGTAAGGTACCATGAACCTGAATATTGGAAATTTGGTGAGACTGGAAACAAATACTTACGTCATGCCACGGGACAGTTGTACGCCATTTCAAAAGATTTGGCTACATATATATCAAATAACCAGCAAGTTCTTCACAAGTATGCTAATGAGGACGTCTCGGTAGGAGCTTGGTTTATTGGACTTGATGTGGAGCATATAGATGATCGAAGACTTTGCTGCGGCACTCCCCCAGATTGTGAGTGGAAGGCCCAAGCAGGGAACGTATGTGTTGCTTCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCAGATAGGATCAAAGAGGTTCATAGGCGATGTGGAGAAAGTGAGAGAGCTTTGTGGAAAGCCTCTTTCTAG 1287 0.439 MGGGHPKLERHFSPPEETMTWKNRGEQSSRSLVSQKWALFLCLASFCAGMLFTNRMWTIPEPKGLARTTAMEAETLNVVSEGCNSRILQEKEVKRDTNNLYQEVSKSHNGIQTLDKTISNLEMELAAARAAQESIRNGAPVSGEHLKRAEFESPAKRRYLMVIGINTAFSSRKRRDSIRATWMPQGEKRRKLEEEKGIVVRFVIGHSATSGGILDRAIEAEDNKHGDFLRLDHVEGYLQLSAKTKTYFATAVKLWDADFYVKVDDDVHVNIGTLGETLVRRRPKPRIYVGCMKSGPVLSQKGVRYHEPEYWKFGETGNKYLRHATGQLYAISKDLATYISNNQQVLHKYANEDVSVGAWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSADRIKEVHRRCGESERALWKASF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0306 428 MobiDBLite consensus disorder prediction 1 24 - -
Lele12g0306 428 Coils Coil 111 131 - -
Lele12g0306 428 Pfam Domain of unknown function (DUF4094) 34 130 IPR025298 -
Lele12g0306 428 FunFam Hexosyltransferase 153 374 - -
Lele12g0306 428 Pfam Galactosyltransferase 173 370 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele12g0306 428 Gene3D - 154 373 - -
Lele12g0306 428 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 115 370 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0306 Lele-ChrLele12 2854208 2858054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0306 19 428 Glycosyltransferase AT1G05170 77.561 0.0 687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0306 12 2854208 2858054 Lele29g0436 29 2659263 2661703 CCT
Lele12g0306 12 2854208 2858054 Lele30g0970 30 13293623 13296095 CCT
Lele12g0306 12 2854208 2858054 Lele31g1111 31 17810672 17813129 CCT
Lele12g0306 12 2854208 2858054 Lele32g0417 32 2629869 2632289 CCT
Lele12g0306 12 2854208 2858054 Lele12g0306 12 2854208 2858054 ECH
Lele09g1011 09 19179837 19183327 Lele12g0306 12 2854208 2858054 hybridization
Lele10g0970 10 20934551 20938100 Lele12g0306 12 2854208 2858054 hybridization