Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0301 ATGGATGGAGGCGGCAAGAGATTTCCCTTACAGGTGAACCTCAATTATTCCCTGCTGCAAGACGAAGAATCTCCCACTGATCATGATGAAAATGAACCCTCTCATCATCATCGTGATCATGACGACCTTAGAGCCCACATAGACGGAATGGATTTCTTCTCCAACAAGGACGACAAGCTCGTCGCCTCCTCCTCCTCCAGCTCCACCGCCTTCGCCCTTCACAGACTTGATTTCCTATCCCCGCCACCGCCCTTGCCCTTTAATGTCAACACTGGTTTAAATCTTCTCACTACCAATATTGGTAGTAATCATCATTCTGCAGTAGAAGATGGTTTATCAATCCCAGTACTTAAAACGGCTCAAGAAGAGTATGATGCTATTAGAGCACGGTTTAAGAAAATGAAGGAAGAAAACGATTGCTTGAGAGAAATGATTAATGAAGTGACTAACAATTACAACGTGCTGCATTCGCGATATATGAATATAGTGCAGAAGCAGAACATCTTCAACAATGGTGAAGACATGTTTGACGACGACGAGAAAGGAAGAAACAAACGATTAATCGAAGGAGCATCATCATCAGTAGTACCTAGACAGTTTATGGATCTTGGACTTGCCACTAATAACGTTAATAATGTTGATAAATCTTCTCTTACAGCAGCACAACAAGATTTTGACTCTACTAGAAAGAGTCAACTCAGTGATGCAAGACTTGTGCTTCAAAAAGAAAAGAAAGAACTTGGTAAGAATATTATTATAAGAGATGACGAAAATAGCCCACCAGCTCAAGCTCTCTCCACTAATAATAATAATAAGATCCCAAAAACCAGTCCTCTTGAAACTGTTGATCAAGCAGAGACTACTATGAGAAAGGCAAGAGTTTCAGTTCGAACACGATCGGAAGACGCCATGGTACAAAGATGTGCTGAGGACAGAACAATCCTGGTTACAACCTACGAAGGGAATCATAACCATCCTTTGCCTCCGGCGGCGATGGCGATGGAGCAGACAACCTCGTCGGCTGCTAGAGTTTTGCTGTCAGGATCATCTTCAAGTTCAGATGGTTTAATGAATCCAAATTTTCTCGCAAGGGCTTTCCTTCCGTTTTCCTCTAGCATGGCTACTATCTCAGCTTCAGCTCCGTTTCCCACTGTTACATTGGACCTAACTAAAAACCCTGACCCTTTTTTCTTCCCGAGGCCTCCGACGACTCCGTTTCAAATTCCATTTGAACCTCACAACATGGTCAATTCTCTGACTTCATTTCTGCCGCAGATATTTGCTCCGGGGGCGGCGATTTACAATCAGTCCAAGTTTTCGGGGCTACAAATGTCTCAAAATCATGACCCTTCCACGTCCTCTCAGGCGGCGGCGCCACCGCAGCAACTGGCTGACTCCGTGAGTGCTACCATTGCCGCTGACCCCAACTTTGCGGCAGCTCTGACGGCGGCTATCACTTCAATTATCGGTGGCGCTCAGCAAAACAATAGCAACAACAGCAACGGTGGTAATTTCCTGGCTAATAATGATAGCAATGGCAATATTACGAATGGTAATAACAATAATAGTGCCAGCTGA 1578 0.4442 MDGGGKRFPLQVNLNYSLLQDEESPTDHDENEPSHHHRDHDDLRAHIDGMDFFSNKDDKLVASSSSSSTAFALHRLDFLSPPPPLPFNVNTGLNLLTTNIGSNHHSAVEDGLSIPVLKTAQEEYDAIRARFKKMKEENDCLREMINEVTNNYNVLHSRYMNIVQKQNIFNNGEDMFDDDEKGRNKRLIEGASSSVVPRQFMDLGLATNNVNNVDKSSLTAAQQDFDSTRKSQLSDARLVLQKEKKELGKNIIIRDDENSPPAQALSTNNNNKIPKTSPLETVDQAETTMRKARVSVRTRSEDAMVQRCAEDRTILVTTYEGNHNHPLPPAAMAMEQTTSSAARVLLSGSSSSSDGLMNPNFLARAFLPFSSSMATISASAPFPTVTLDLTKNPDPFFFPRPPTTPFQIPFEPHNMVNSLTSFLPQIFAPGAAIYNQSKFSGLQMSQNHDPSTSSQAAAPPQQLADSVSATIAADPNFAAALTAAITSIIGGAQQNNSNNSNGGNFLANNDSNGNITNGNNNNSAS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0301 525 Gene3D WRKY domain 268 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele12g0301 525 ProSiteProfiles WRKY domain profile. 305 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele12g0301 525 MobiDBLite consensus disorder prediction 22 41 - -
Lele12g0301 525 MobiDBLite consensus disorder prediction 260 277 - -
Lele12g0301 525 MobiDBLite consensus disorder prediction 442 461 - -
Lele12g0301 525 MobiDBLite consensus disorder prediction 256 277 - -
Lele12g0301 525 MobiDBLite consensus disorder prediction 21 41 - -
Lele12g0301 525 MobiDBLite consensus disorder prediction 500 525 - -
Lele12g0301 525 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 120 305 IPR044810 GO:0003700
Lele12g0301 525 Coils Coil 117 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0301 Lele-ChrLele12 2765513 2767649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0301 88 501 WRKY Transcription Factor Family AT1G62300 40.000 2.93e-68 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1128 31 17923364 17933343 Lele12g0301 12 2765513 2767649 CCT
Lele32g0398 32 2518085 2521142 Lele12g0301 12 2765513 2767649 CCT
Lele12g0301 12 2765513 2767649 Lele12g0301 12 2765513 2767649 ECH
Lele10g0976 10 21021013 21023317 Lele12g0301 12 2765513 2767649 hybridization