Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0300 ATGGCTGACTCTGCTTCATCTCCTTTCAAGAAAATCCAGATTCAAAGGGATGACACCACATTTGAGGCATATGTTATCGGCAAAGAAGATGCTCCTAGACTTGTTGTGCTTCAGGAATGGTGGGGTGTGGATTTTGAGATAAAGAATCATGCTGTGAAGATTTCCCAGCTTGGTTCTGGATTTAAAGCTCTTATCCCAGATCTGTACAGAGGAAAGGTTGGTCTTGATGCAGCAGAAGCAAAGCATTTGATGGATGGTCTTAATTGGCAGGGGGCTGTAAAGGATAGCCATGCTTCAGTGGCAGAAGTTCCAGAGGTTGATGCTGTTTTAGCTTTCTATGGAGTCCCTCCTTTAGAGCTTGCTGACCCTAGTCAAGCCAAGGCTCCAGTTCACGCCCAATTTGGAGAGCTAGATAATGTCGTCAGCTTTTCAGATGTCACGGAAGTGGTGCCACTATCTGCATTCCATCTTCGATGGTTTCAGGCTGCCAAGATCTTGGAGGAGAAGCTGGAGTTATCAGGAGTGCCTTATGAGGTACACATATATCCTGGAAATGGACATGCATTCATAAACAGGTCCCCTGAAGGAATTAAGAGGAGGAAGAACATGGGAATGGCTGATGAAGATGAAGCTGCTGTCGAACTCGCTTGGTCACGCTTCCATTCCTGGATGACTCGTTACTTGTCCGACCGATTCATTTACTTGTCCGTATGCCCTAAGTGGTATAGGGTTTACCAGCCCACAAACTTGAAGCTGTGA 759 0.4611 MADSASSPFKKIQIQRDDTTFEAYVIGKEDAPRLVVLQEWWGVDFEIKNHAVKISQLGSGFKALIPDLYRGKVGLDAAEAKHLMDGLNWQGAVKDSHASVAEVPEVDAVLAFYGVPPLELADPSQAKAPVHAQFGELDNVVSFSDVTEVVPLSAFHLRWFQAAKILEEKLELSGVPYEVHIYPGNGHAFINRSPEGIKRRKNMGMADEDEAAVELAWSRFHSWMTRYLSDRFIYLSVCPKWYRVYQPTNLKL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0300 252 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 12 101 - -
Lele12g0300 252 Pfam Dienelactone hydrolase family 21 99 IPR002925 GO:0016787
Lele12g0300 252 Pfam Dienelactone hydrolase family 100 227 IPR002925 GO:0016787
Lele12g0300 252 Gene3D alpha/beta hydrolase 100 228 IPR029058 -
Lele12g0300 252 SUPERFAMILY alpha/beta-Hydrolases 9 228 IPR029058 -
Lele12g0300 252 Gene3D alpha/beta hydrolase 11 99 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0300 Lele-ChrLele12 2750258 2758835 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0300 12 2750258 2758835 Lele29g0432 29 2637946 2639897 CCT
Lele12g0300 12 2750258 2758835 Lele30g0975 30 13324735 13326800 CCT
Lele12g0300 12 2750258 2758835 Lele31g1115 31 17831767 17833635 CCT
Lele12g0300 12 2750258 2758835 Lele32g0411 32 2600826 2602888 CCT
Lele29g0418 29 2557129 2560118 Lele12g0300 12 2750258 2758835 CCT
Lele30g0991 30 13410803 13415757 Lele12g0300 12 2750258 2758835 CCT
Lele12g0300 12 2750258 2758835 Lele12g0300 12 2750258 2758835 ECH
Lele09g1020 09 19404731 19408155 Lele12g0300 12 2750258 2758835 hybridization