Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0293 ATGGAGCTAGCTAGTGTGGTTAATGTTGTTCGTCGTGGCCTTTATGTGTCAGCCAAAAAGTCATGCGTACCCAGAACAAGATGCCATATTATTGTAAGTGTTCCAAGCAGCGGTTTCCTTACCATAGTGACAGTTCGATGTGGGCATTGTGCTAATTTACTGTCAGTCAACATGGGAGCTTCTCTTCAAACATTACCTCCTCAAGCGCTTCAGAAACAGCAGCTAAGCTTTGAAGAATCAAGCGACAGCAGAGAAGAGGGATCATCATCTTCAAAATGCGGTAAATTTGCTGCATTTGAGTCTGCAGAGCATGAGCAGCATAGGATTCCTCCCATTCGTCGGAGGAAATACAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCGTTTAGCACTGCGGCCAAAAACGTGA 420 0.4524 MELASVVNVVRRGLYVSAKKSCVPRTRCHIIVSVPSSGFLTIVTVRCGHCANLLSVNMGASLQTLPPQALQKQQLSFEESSDSREEGSSSSKCGKFAAFESAEHEQHRIPPIRRRKYKGLRLVIQISATGRRLALRPKT 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0293 139 Pfam YABBY protein 30 97 IPR006780 GO:0007275
Lele12g0293 139 PANTHER PROTEIN YABBY 6-RELATED 27 115 IPR006780 GO:0007275
Lele12g0293 139 MobiDBLite consensus disorder prediction 73 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0293 Lele-ChrLele12 2638171 2640247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0293 30 113 C2C2-YABBY Transcription Factor Family AT1G08465 42.529 1.14e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele12g0293 YABBY 4.9e-15 CL0114