Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0286 ATGGATGCCGATTCCTCGATGTCACCAGAAAGCGATCACGATCGTGCCGTTCAAAATCATACTGCTAGTCAGGCTCCGGCAACTATGGATAGAGAGCAGCCAGGAGAGGAGCCGTCATCCGGAGGCGCGTCTCAGGCACAGTCGCCAGCGCAGCAGCAACAACAACAGCAGGCGGCTGCTCAGGTGCAGCAGAATCCTGTTGTTGGACCTAGGCTGGCGCCAACTTACACTGTTGTGAATGCAATTTTAGAAAAGGAGGAGGATGGGCCAGGGCCGAGGTGCGGCCACACTTTGACGGCGGTGGCAGCTGTTGGAGAGGAGGGTACACCTGGATGCATTGGTCCGAGGCTGATTTTGTTTGGTGGTGCCACTGCCCTTGAAGGGAATTCTTCGGCTGCTGGGACTCCTTCATCCGCCGGGAATGCTGGCATACGCTTAGCTGGTGCCACGGCTGATGTACACTGCTATGATGTGTTGACTAATAAATGGTCTAGGATAACTCCCTATGGAGAACCTCCAACCCCAAGGGCTGCACATGTGGCAACTGCTGTAGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGATCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCACAGAGTCGTTGTTCAAGGCCCTGGACCAGGGCCACGTTATGGACATGTGATGGCTTTGGTGGGGCAGAGGTATCTTATGGCAATTGGAGGAAATGATGGAAAAAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTACGAATGGCATAAGTTGGAACCAGAAGGAGAAGGCCCACCGCCATGCATGTATGCAACTGCTAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGAAGGGACGCCAATAGTGTGCCACTGGCTAGTGCATATGGACTTGCGAAGCATAGGGATGGTCGATGGGAATGGGCAATTGCCCCTGGTGTTTCACCATCTCCAAGATATCAGCATGCAGCAGTATTTGTTAATGCAAGGCTCCATGTGTCTGGAGGAGCGCTTGGTGGAGGGCGTATGGTAGAAGACTCATCCAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTCACCAGTCCAAGGACTGGTAGATACAGTGCTGATGCAGCTGGTGGGGATGCCTCAGTTGAATTGACAAGGCGTTGTAGGCATGCAGCTGCTGCCATTGGTGACCTTATATTTATTTATGGCGGTTTACGTGGCGGAGTATTGATCGATGACCTACTTGTTGCTGAAGATCTCGCCGCTGCTGAAACAACAAATGCTGCTTCGCATGCTGCTGCTGCAGCAGCAGCTGCATATAATGTACAAGCAGGACGATTACCTGGGCGATATGGATTTGTTGATGATAAGAACAGGCAAACAATGTCTGAAGCAACTGCTGATGGTTCAGTTGTTCTGGGAAATCCTGTGGCTCCCCCTATAAATGGTGACATGTATACTGATATCAGCACTGAGAATGCCATGCTCCAGGGAACCCGGAGGACTAACAAAGGTGTCGAGTATCTTGTTGAAGCGTCAGCTGCAGAAGCTGAAGCTATAAGTGCCACATTAGCTGCTGCTAAAGCACGTCAGGAGAATGGAGAAATTGAATTACCTGATAGAGACCGTGGGGCCGAGGCTACCCCTAGTGGGAAACCAATATCTTCTCTGATTAGGCCTGATTCAGCAGGCCCAAATAATATTGTTCCTGGTGGAGTTCGGCTGCATCATAGAGCTGTTGTCATAGCTGCAGAGACTGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCAATTGATCAGTTTGAAAATGAAGGCAGGCGAGTCAGTTATGGAACTCCAGAAAGTGCAACTGCAGCTAGAAAATTATTAGATCGGCAGATGTCAATCAATAGTGTCCCAAAGAAGGTCATAGCTCACCTATTAAAACCTCGAGGCTGGAAGCCACCAGTTCGCCGGCAGTTTTATTTAGATTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAGCGGATATTTTCAAGTGAACCAACTGTTTTACAACTTAAGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGTCTCTTTGATGAATATGGTTCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGACCGTGGTCAACACAGCCTGGAAACTATAGCTCTTCTACTTGCTCTGAAGGTTGAATATCCCAACAATGTACACTTGATACGTGGAAATCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCATCGGATTAATCGTTTGTTTAATTGGCTTCCCCTGGCCGCCCTAATTGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCACGTGGAACAGATTGAGAATCTTCAGCGTCCAATTACAATGGAAGCAGGGTCAATTGTGCTGATGGATCTATTATGGTCTGATCCTACAGAGAATGACAGTGTAGAAGGACTGCGGCCAAATGCTAGGGGTCCAGGGTTAGTTACTTTTGGGCCTGACCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCTCATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCTCAGGGACATTTGATCACTCTATTCTCAGCTACAAATTACTGTGGTACTGCAAATAATGCTGGGGCGATATTAGTCTTGGGCAGAGATCTTGTTGTGGTTCCTAAATTGATTCATCCATTACCACCTGCACTTTCCCCGGAAGCATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAATAGACCGCCGACTCCAACTAGAGGTCGTCCTCCTGTTGCTAATGATCGAGGTTCACTTGCTTGGATATAA 3024 0.4795 MDADSSMSPESDHDRAVQNHTASQAPATMDREQPGEEPSSGGASQAQSPAQQQQQQQAAAQVQQNPVVGPRLAPTYTVVNAILEKEEDGPGPRCGHTLTAVAAVGEEGTPGCIGPRLILFGGATALEGNSSAAGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLIDDLLVAEDLAAAETTNAASHAAAAAAAAYNVQAGRLPGRYGFVDDKNRQTMSEATADGSVVLGNPVAPPINGDMYTDISTENAMLQGTRRTNKGVEYLVEASAAEAEAISATLAAAKARQENGEIELPDRDRGAEATPSGKPISSLIRPDSAGPNNIVPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFYLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETIALLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSPEASPERHIEDTWMQELNANRPPTPTRGRPPVANDRGSLAWI 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0286 1007 FunFam Serine/threonine-protein phosphatase 72 269 - -
Lele12g0286 1007 Gene3D - 271 466 IPR015915 GO:0005515
Lele12g0286 1007 Gene3D - 41 270 IPR015915 GO:0005515
Lele12g0286 1007 SUPERFAMILY Kelch motif 148 437 IPR015915 GO:0005515
Lele12g0286 1007 MobiDBLite consensus disorder prediction 1 64 - -
Lele12g0286 1007 SMART pp2a_7 677 961 IPR006186 GO:0016787
Lele12g0286 1007 Pfam Calcineurin-like phosphoesterase 705 912 IPR004843 GO:0016787
Lele12g0286 1007 FunFam Serine/threonine-protein phosphatase 641 980 - -
Lele12g0286 1007 CDD MPP_Bsu1_C 657 959 IPR041758 -
Lele12g0286 1007 Gene3D - 640 980 IPR029052 -
Lele12g0286 1007 MobiDBLite consensus disorder prediction 38 64 - -
Lele12g0286 1007 FunFam Serine/threonine-protein phosphatase 273 474 - -
Lele12g0286 1007 MobiDBLite consensus disorder prediction 1 17 - -
Lele12g0286 1007 ProSitePatterns Serine/threonine specific protein phosphatases signature. 774 779 IPR006186 GO:0016787
Lele12g0286 1007 MobiDBLite consensus disorder prediction 983 1007 - -
Lele12g0286 1007 MobiDBLite consensus disorder prediction 553 567 - -
Lele12g0286 1007 MobiDBLite consensus disorder prediction 552 585 - -
Lele12g0286 1007 SUPERFAMILY Metallo-dependent phosphatases 662 962 IPR029052 -
Lele12g0286 1007 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1007 - -
Lele12g0286 1007 PRINTS Serine/threonine phosphatase family signature 841 868 IPR006186 GO:0016787
Lele12g0286 1007 PRINTS Serine/threonine phosphatase family signature 705 732 IPR006186 GO:0016787
Lele12g0286 1007 PRINTS Serine/threonine phosphatase family signature 923 939 IPR006186 GO:0016787
Lele12g0286 1007 PRINTS Serine/threonine phosphatase family signature 740 767 IPR006186 GO:0016787
Lele12g0286 1007 PRINTS Serine/threonine phosphatase family signature 901 921 IPR006186 GO:0016787
Lele12g0286 1007 PRINTS Serine/threonine phosphatase family signature 773 797 IPR006186 GO:0016787
Lele12g0286 1007 PRINTS Serine/threonine phosphatase family signature 811 837 IPR006186 GO:0016787
Lele12g0286 1007 Pfam Kelch motif 334 380 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0286 Lele-ChrLele12 2551934 2572803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0286 669 904 Calmodulin-binding Proteins AT5G63870 29.044 6.02e-26 107