Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0279 ATGGGGACGTTCTTTCATGGTAGCAATTCAGAAATCCAATCTTCTGGTGCTTCTGCCGCCGCTGCCGGCGGCGGTGATGGCTTCCACACGCTTTACCTTCTCAACCCCAGCAGCACCGCTCCCTACGTTCCCTACTCCGATACAAGCCCCCACCCTCAACCGACGCCCAACATGCTTCTGCTCAATCCCAATTCTCCCCCTAACGCGCTCCACCTCACTACCCTCTCCCACGCGCCACCTCCTTCCTCCTCCAACCATAATCCCGATGATCCCACCCCTCCCTCCTTTCTTGGACACGAAATCTCCACCTTCCATGGCTTCACCGCTTCGGCCGCGGCTGCTCCTCCTCCGCGTGTCCACTACAACCTCTGGAGTTCAATGATTGATCCTCACCCAACATCAGCCGTGGCAACCGCGTCTAACAGTTCTGGTGGGGGGCCCTCCACCTCCGCCGCCCTAGACGCTTCGTCCTATATGAGTTTCAGGAGGCCTACTCATCAGCAGGGTCTGTCGCTGAGCCTCTCATCTCAACAGACATCTTATAAGTCACTTTCCGGTGAGTTTGACGTTCCGGGACAACCCCAAGCTGCTGCCATACCAACCTCGAGCTGCGACGATGTGCGGATTCTGGTTCCAAGTAATCATCCTCTCTCGAATGGAATTTCAAATGTTCAGAGCTTTGTTTTAGGATCCAAGTACTTGAGAGCAGCTCAGGAGATTTTGGATGAAGTTGTTAATGTGGGTACTAAGGGAATCAACCAAGAGGAGGGGGCTATAAAAGAGAAAACGAAAGCGAATAAAGAATCAACATCTGGTTGGAATCGCGACGGTTTAAGTGGCGGTGACGGTGGAGGAGGAGGAGAAAACAGTGAAAATGGGAAGCAACAAGGAGGTGAACTCAGTACAGCACAGAGACAAGAACTTCAGATGAAGAAGTCCAAGCTTGTCACCATATTTGATGAGGTGGAACAAAGGTATAGACAGTATCACCACCAAATGCAGATAGTGCTAGCATCCTTCGAGCAAGCTGCTGGATATGGAGCAGCAAAAACATACACATCTCTAGCCCTAAAAACAATCTCGAAGCAATTCCGATGTCTCAAGGACGCGATCGCTTCGCAAATAAGAGCGACGAGCAAGACATTGGGTGAAGATGATTGCTTGGGAGCTAAGTTAGAAGGTTCCAGGCTGAGGTTTGTGGATCATCATCTTCGCCAACAAAGAGCTTTGCAGCAACTGGGAATGATTCAGCATAATGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGAGCCGTTTCCATTCTTCGTGCATGGCTTTTCGAGCATTTTCTTCACCCCTATCCCAAGGACTCCGATAAAGTTATGCTTGCAAAACAAACTGGACTTACACGTAGCCAGGTGTCAAACTGGTTCATAAATGCTCGAGTTCGGCTATGGAAACCCATGGTGGAAGAAATGTACATGGAAGAAATGAAAGAGCAAGATGGAAATAATAATAAGGAGGTGGGGTCAACAAGCACTAACAAGGATAATTCACAGCCACAAGATCATCATCAGGTGAAAGGCTTCCAATCAAATAATCCAGATAAAAGTTTCAATAACCAAACAACTACTATTGCTCCAACCGACATCTCAAATTCCACAATCTACCTTCATCATCCTCATCATTCTTCGTCAGGATTCCCAGGACCGTCTTCTCATCATCATCATCATGACATGCAAATAAGAACGAGTCCCAAAAAGCCAAGAAGTTCAGAAGTAATGAACAATTCTCCGAGTAGTATCCTCTCCGTGGACATGGAAATGAAGCCCGGAGATCACAACACAGACAGATTAGAAGGCAACACTACAAATTTTGGCATGATAATTAGTAATAACCATGGGAATGATCATGGAGGAGGAGGAGGATATGGGGGGTTCACCATGGAAGAGATGGGAAGGTATAACGTGACTTCTGACCAATTGGCTCCCAGGTTCCATGGAAACGGCGTGTCGCTTACTCTCGGACTTCCCCACAGTACTGATAATAACCTTCCTAGCCCTGGCTTTCTGTCGAACAACATGAACTTGACTGCTGATGGAACCGAGTTCTGCGCGATCAACGCTCCGCCGCAGTCTCATTCCAACATAAGTTATGAGAACATTGATCACATTCAGAACAGAAAGAGGTTTGCTGCCCAGTTATTGCCAGATTTTGTGGCCTGA 2205 0.4825 MGTFFHGSNSEIQSSGASAAAAGGGDGFHTLYLLNPSSTAPYVPYSDTSPHPQPTPNMLLLNPNSPPNALHLTTLSHAPPPSSSNHNPDDPTPPSFLGHEISTFHGFTASAAAAPPPRVHYNLWSSMIDPHPTSAVATASNSSGGGPSTSAALDASSYMSFRRPTHQQGLSLSLSSQQTSYKSLSGEFDVPGQPQAAAIPTSSCDDVRILVPSNHPLSNGISNVQSFVLGSKYLRAAQEILDEVVNVGTKGINQEEGAIKEKTKANKESTSGWNRDGLSGGDGGGGGENSENGKQQGGELSTAQRQELQMKKSKLVTIFDEVEQRYRQYHHQMQIVLASFEQAAGYGAAKTYTSLALKTISKQFRCLKDAIASQIRATSKTLGEDDCLGAKLEGSRLRFVDHHLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQDGNNNKEVGSTSTNKDNSQPQDHHQVKGFQSNNPDKSFNNQTTTIAPTDISNSTIYLHHPHHSSSGFPGPSSHHHHHDMQIRTSPKKPRSSEVMNNSPSSILSVDMEMKPGDHNTDRLEGNTTNFGMIISNNHGNDHGGGGGYGGFTMEEMGRYNVTSDQLAPRFHGNGVSLTLGLPHSTDNNLPSPGFLSNNMNLTADGTEFCAINAPPQSHSNISYENIDHIQNRKRFAAQLLPDFVA 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0279 734 SMART HOX_1 421 485 IPR001356 GO:0003677
Lele12g0279 734 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 138 506 - -
Lele12g0279 734 MobiDBLite consensus disorder prediction 492 591 - -
Lele12g0279 734 Pfam Homeobox KN domain 438 477 IPR008422 GO:0003677|GO:0006355
Lele12g0279 734 ProSiteProfiles 'Homeobox' domain profile. 418 481 IPR001356 GO:0003677
Lele12g0279 734 MobiDBLite consensus disorder prediction 43 100 - -
Lele12g0279 734 Gene3D - 424 503 - -
Lele12g0279 734 MobiDBLite consensus disorder prediction 62 83 - -
Lele12g0279 734 MobiDBLite consensus disorder prediction 289 306 - -
Lele12g0279 734 FunFam BEL1-like homeodomain protein 9 424 486 - -
Lele12g0279 734 SUPERFAMILY Homeodomain-like 422 488 IPR009057 -
Lele12g0279 734 CDD homeodomain 421 481 IPR001356 GO:0003677
Lele12g0279 734 MobiDBLite consensus disorder prediction 258 306 - -
Lele12g0279 734 MobiDBLite consensus disorder prediction 498 564 - -
Lele12g0279 734 MobiDBLite consensus disorder prediction 47 61 - -
Lele12g0279 734 Pfam Associated with HOX 228 372 IPR006563 -
Lele12g0279 734 SMART prehox3 222 373 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0279 Lele-ChrLele12 2427158 2430806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0279 1 734 Homeobox Transcription Factor Family AT2G35940 41.858 3.36e-132 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele12g0279 POX 3.3e-47 No_clan