Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0277 ATGGGCTTTTTGTTGAAACAAATTCTCAAGACTCTCTGCAGTCGGAATCAATGGTCTTACGCTGTCTTCTGGAAGATCGGCCGCCATAACCCCAAGCTATTAATTTGGGAAGATTGCTATTATGAACCCTTGCCATGTCAATTTCCTAGGGTCATCGCTGGAACAGAGACTTCTAGTTTGCCTTTTGTGAGTGGGGAAGGCTTCTGGCTTTCTTCTGATTCTCCTTCTTCTCAGATAGGAACCCAAGAAGAGGACAGAGTCTGCGCTTTGATTAACAAAATGATGGCGAATATTTCGGTCAATGTCATGGGTGAAGGGATTATTGGGCGGGCTGCATTTAGAGGAAACCACCAGTGGATTAATTTGAACAATTTTAGAAGAGAAGCATGTCCGCTGGAGGTGTTCAATGAGGTGAATCTCCAGTTTTCAGCTGGAATGCAGACAGTAGTAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCAATAATGGAGAACATGGGATTAGTGAATGAAGTAAAGAGCTTTACTATGCAATTGGGGTGTGTCCCTGGTGTTCTTCCATCTGAAGAGTTTTCAGAAAAAGCTTCTAGTGAAAGATTTGGTAATCCTGTTACTGTCGGGATGCCTGTATCTGTTGATCTGCCAGTAATTACCTCCAATACCACACCCTCAGTAACTTATGGCTTCAGCCAAGAAATCAGTTTGTCTTGCACTTCAAGCCCTATTGTTCAACCAGCTCATCCTCTTAAAGGAGAGATAAATAACCATCCAGGTTCTGTATTGACACATCAAACCCCTAACATTACTCATATATTATCCAATTACCACGATAATCTTTGTGAACCTTCATCAATACCAATGATGAACTTAAGTTTTGATGTCCAGCCTGAGAATTTACTTATGGAGGCAGAGGTGATGCCCTTGAATCTTGATTCATGTCTGCCACAATATTCTGCCTCATTGAATGCTAGATCTGCGTCCAATAAATTTACTGACTTTAGCCAATCCGGTCTGGGTGACTGCAGCATAAAAGTTAAGGAAATAGAAAATTTGTCTAGCTGTGGGAGTCAAAGTTATCTTAAATCAAATTTGACTGTATCAAATACATTGTCTCAACTGAAAAATAGTGGAGGCCATCTACTTGATCACAATCAGATTACTGTTAGTTGTTCTTCAATTCATGGTGGAACGAGCAGACTTTTGGGGCCAAATCTCGTCTCCAGCTCTGTTTCTAATCCTTCTAAAGCTGCCACTGCTGATTTTTGTGAAACCAGGAAAGCTAGGCCTGGGCTCCAAAATGATGGTTTAGCAAAAGGAGGGTGCTACTCTCCATCTAACTTGACCAGTCAATCTGGTACTAGTCCCATGCCTCTAGAAGGTTATGATCAGAACAATATTCCTGTAGATTTAAAGCATGCTTATGATAAATTGGCTCCAACAGGCCAAAGAATGGATGATGATCTGCTGCAGGCCATTCAGATCCCATCTCTTTATCTTTTGGAGCATCAGGTGTCTATGAACGATCACATCCCTACTTGTCTTCTACCTCCATCAAGCGATGACCTATTTGATGTTTTAGGTGTGAATCTTAAAAACAAACTACTGAATGAAAGCTGTAATAAGTTGCTTGGCAAAGAATCAAATGCTGGTGCTGAAATTCTGCAAAACAAGGCAACATTTTTGAGCATGCACAATAGAGATCCTGATGTTTATTTAATTAATGAAGCCATTTCAGATGGTGATGTCTTCTCTGAGAGGGGCGATGACCATCTCCTGGATGCTGTGGTCTCAAGGGCAAAGTCTATTGGGAAACAGGATTGTGATGATATGTCTTGCTGGACAACATTGACTAGGACTAGTAATGCTTCTGTTCCCTCTCCTGCTTTTAGGAAGGCTATGTGTAATCATACTCAGGGTGGATTCTTTGGTTTTCCTAAAGACGTGAGTAAAGCTGGTGCTGCAGAAACTAGTTCTCTTAGGTCTGGATGTAGCAAGGATGAGGCTCCGTCTATTTATGGGTCTCAACTTAGTTCATGGGTTGAGAATGCTACAAATGTGAAGCATGAAAATAGCGCCTCAACTGGATTCTCTAAGCGGCCTGATGAAGCCTGTAAGTCAAATCGTAAAAGGCATAAGCCTGGGGAGAACCCCAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGCTACGGGAAATTGTTCCAAATGGAGTGAAATGTAGCATAGATGCACTTCTTGAACGAACAATCAAGCACATGCTTTTCTTGCAAAGTGTGACAACGCATGCTGACAAGCTAAAACAAACAGGGGAATCTAAGATTATGAGTAAGGAAGGTGGACTGCTTTTAAAAGACAATTTTGAGGGAGGGGCCACTTGGGCATATGAGATTGGCTCACAATCAATGGTTTGCCCCATCATAGTAGAGGATCTGAATCCCCCTCGTCAGATGTTAGTGGAGATGCTGTGTGAAGAACGAGGTTTCTTTTTGGAAATAGCTGACTTAATCAGAGGATTGGGGTTGACTATATTGAAGGGGGTGATGGAAACCCGAAATGACAAGATCTGGGCATGCTTTGCTGTAGAGGCAAATCGCGATATAACAAGGATGGAGATATTCATGTCTCTGGTTCATCTTTTGGAGCAAACAGGGAAGGGAACTGCATCTTCATCGAACCCCATATATCACTCCTTCCCTCAAGCCACCCAGATAGCCGCAAGGGGCGGACCTAGTAGTGTGCAATGA 2775 0.4252 MGFLLKQILKTLCSRNQWSYAVFWKIGRHNPKLLIWEDCYYEPLPCQFPRVIAGTETSSLPFVSGEGFWLSSDSPSSQIGTQEEDRVCALINKMMANISVNVMGEGIIGRAAFRGNHQWINLNNFRREACPLEVFNEVNLQFSAGMQTVVVIPVLPHGVVQLGSFLPIMENMGLVNEVKSFTMQLGCVPGVLPSEEFSEKASSERFGNPVTVGMPVSVDLPVITSNTTPSVTYGFSQEISLSCTSSPIVQPAHPLKGEINNHPGSVLTHQTPNITHILSNYHDNLCEPSSIPMMNLSFDVQPENLLMEAEVMPLNLDSCLPQYSASLNARSASNKFTDFSQSGLGDCSIKVKEIENLSSCGSQSYLKSNLTVSNTLSQLKNSGGHLLDHNQITVSCSSIHGGTSRLLGPNLVSSSVSNPSKAATADFCETRKARPGLQNDGLAKGGCYSPSNLTSQSGTSPMPLEGYDQNNIPVDLKHAYDKLAPTGQRMDDDLLQAIQIPSLYLLEHQVSMNDHIPTCLLPPSSDDLFDVLGVNLKNKLLNESCNKLLGKESNAGAEILQNKATFLSMHNRDPDVYLINEAISDGDVFSERGDDHLLDAVVSRAKSIGKQDCDDMSCWTTLTRTSNASVPSPAFRKAMCNHTQGGFFGFPKDVSKAGAAETSSLRSGCSKDEAPSIYGSQLSSWVENATNVKHENSASTGFSKRPDEACKSNRKRHKPGENPRPRPKDRQMIQDRVKELREIVPNGVKCSIDALLERTIKHMLFLQSVTTHADKLKQTGESKIMSKEGGLLLKDNFEGGATWAYEIGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMETRNDKIWACFAVEANRDITRMEIFMSLVHLLEQTGKGTASSSNPIYHSFPQATQIAARGGPSSVQ 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0277 924 MobiDBLite consensus disorder prediction 707 732 - -
Lele12g0277 924 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 913 IPR043561 GO:0003700|GO:0006355
Lele12g0277 924 CDD bHLH_AtLHW_like 721 790 - -
Lele12g0277 924 MobiDBLite consensus disorder prediction 695 732 - -
Lele12g0277 924 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 180 IPR025610 -
Lele12g0277 924 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 717 766 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0277 Lele-ChrLele12 2373484 2378430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0277 525 895 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 55.496 8.88e-114 361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1046 09 19714650 19719873 Lele12g0277 12 2373484 2378430 hybridization
Lele10g0997 10 21439688 21444873 Lele12g0277 12 2373484 2378430 hybridization