Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0271 ATGCTTGGGATGCAGAGTCGTGTTGATCCTACTGTGCAAGCCCCTCATGCCCTTTGCATTTGTCCAACAAGAGAATTGGCTATTCAGAATACGGAAGAGTGGATGAGGCATCGTCAACTTCCATCAGAACTGCAAGAACGTGTACGTCGGTTTGTCAAATACAAATGGCTAGCCAGTAGAGGTGGAGATGGAAAAAAAAAAACTATTTTGCGTTCTTTACCTTTGGACATTGAGGTGATTATCTCTGATGCTAATGTCAGTGGAGAAGGAGCACATAAAATGATGTCTTTCATACGAAGTCAAAGGAGTCTCCAAGATTATAATCCAAATACAAGACATTGTTTATATGGGCTGGATGCTGATTTGATAATGTTAGCCAGTGTTGAAAAGTTCATACTTGTGGTTGGAACATATGAAGAGAAACTTCTTGCGAAAAGATCGAAATTAAGAGGGAAAACATTGAGAATATGA 471 0.397 MLGMQSRVDPTVQAPHALCICPTRELAIQNTEEWMRHRQLPSELQERVRRFVKYKWLASRGGDGKKKTILRSLPLDIEVIISDANVSGEGAHKMMSFIRSQRSLQDYNPNTRHCLYGLDADLIMLASVEKFILVVGTYEEKLLAKRSKLRGKTLRI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0271 156 Gene3D - 21 147 - -
Lele12g0271 156 Pfam XRN 5'-3' exonuclease N-terminus 43 126 IPR004859 GO:0003676|GO:0004527
Lele12g0271 156 PANTHER 5'->3' EXORIBONUCLEASE 76 126 IPR027073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0271 Lele-ChrLele12 2336636 2339811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0271 29 77 Ion Channels AT3G48010 71.429 7.87e-18 77.4