Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0261 ATGGAAGATCTTCCTCCTGGTTTTCGCTTCTACCCTACAGAGGAAGAACTCGTGTCTTTCTACCTCCATAACAAGCTTCAAGGTCCAAGCAGCAGCGACCACATCAACAGAGTCATCCCTGTCATTGGCATTTATGATTTTGAACCCTCCCAGCTTCCCAAGCTTGCTGGAGAGATGTGTCCTGGAGATACAGAGCAATGGTTCTTCTTCTCGGCGATACAAGAGAGGGAAGCCAGAGGAGGAAGGCCAAACAGAACCACAGCTTCTGGGTATTGGAAAGCCACTGGTTCTCCAGGGTACGTTTACTCTTCTGATAACAGAGTCATTGGGTTGAAGAAAACCATGGTTTTTTACAGAGGCAAAGTTCCTTCCGGAAAGAAAACCAAGTGGAAGATGACCGAATACAGAGCCATTGAATTCTCTCCCCAATCCTCCTCCATCGCTACTCCTAAGTTGAGGCAGGAATTCAGCTTGTGCCGAGTTTACGTGATATCGGGAAGCTTTCGAGCATTTGATCGCCGCCCTTTAGCTTCTTCTTCAACGGGTGAACATGATCAGAATACAGGGGTGGATGAATCGAGCTTGCATGGACTTCCAGATGGTCAAGGATCAAGTTCTGCAAACGGGAATGTAAATAATGAGGAGGAGGAAGAAGATCTGTGGGAATGGGAACAGTTTACTACTTTGGATGATTATGATAATTATGACTTAAATCCTTGA 720 0.4597 MEDLPPGFRFYPTEEELVSFYLHNKLQGPSSSDHINRVIPVIGIYDFEPSQLPKLAGEMCPGDTEQWFFFSAIQEREARGGRPNRTTASGYWKATGSPGYVYSSDNRVIGLKKTMVFYRGKVPSGKKTKWKMTEYRAIEFSPQSSSIATPKLRQEFSLCRVYVISGSFRAFDRRPLASSSTGEHDQNTGVDESSLHGLPDGQGSSSANGNVNNEEEEEDLWEWEQFTTLDDYDNYDLNP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0261 239 SUPERFAMILY NAC domain 3 162 IPR036093 GO:0003677|GO:0006355
Lele12g0261 239 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Lele12g0261 239 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 181 - -
Lele12g0261 239 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Lele12g0261 239 MobiDBLite consensus disorder prediction 176 239 - -
Lele12g0261 239 MobiDBLite consensus disorder prediction 180 211 - -
Lele12g0261 239 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Lele12g0261 239 MobiDBLite consensus disorder prediction 212 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0261 Lele-ChrLele12 2258449 2259339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0261 2 227 NAC Transcription Factor Family AT5G22380 55.128 6.96e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele12g0261 NAM 4.3e-29 No_clan