Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0259 ATGCAAGGAGAGCAGCAGAGAATAAACGACGTGGTTTCGAGGGGAGCTCAGATGTCCATCGCTGCTTCGTCCATGTTTCCTGGATTCAGGTTCTGTCCTACCGACGAAGAGTTGATTTCCTATTATCTCAGCAAGAAATTGGAAGGCCATGAAGAAAGCGTTCAAGTTGTTTCTGAGGTTGAGATTTGCAAATACGAGCCTTGGGATTTACCAGCCAAATCGTTTATTCAATCAGATAACGAGTGGTTCTTCTTCTCTCCTCGTGGAAAAAAGTACCCAAATGGATCACAAAGTAAGAGGGCAACCGAATGTGGGTATTGGAAGGCCACTGGAAAAGAGCGCAATGTAAAGTCAGGTTCTAATGTTATAGGCACTAAGCGAACTTTGGTATTCCATATGGGTCGTGCCCCAAAAGGGGAAAGAACAGAATGGATTATGCATGAGTACTGCAGCAACGACAAATCCCAGGATTCTTTAGTTGTGTGTCGGCTAAAGAGGAATACAGAGTTTCGTCAGAACGATGCTTCAAACAGAGCATCTTCAAGTCAACAGCAGGCCGTGAATTCTCATGAAAGCAACTGTGCTATCTCCGAAGCTGAGATAGATCAGAGAGGTGTGTGTGAACAAGATAAAGGGGTTGGATGCAGTTCAAAGCGCAGTAGCTCCAGTTACGATTCTCCATTAACGGAGCAAATTGATTCTGCCTCTGAATCCAATCAAAGAGCATTCAACTATGACGCTGCTGTCACAGAATCTACAAGTCACCAAAAGGAGGTGGATGAAGAGGATTGCTATGCTGAGATACTGAAGAATGATATAATCAAATTAGATGAATCTTCATTCCCGTCGCAAGAGGCTCACGAGGTAAGATCGCAGCAGGATCCTGCTCAGGAACTTCCATTCCAAGGCACAGCTCAACGAAGAATTAGATTAAAGGTAGATAAATCAAGGCGTCGTGCAGCTGCAGGACTTGGTTTTGCAAGCTCAAAGCGCCCATCCAAGAATACCACCACCCTCTTTGGTATATTGACAAATCGAGTGCTGTTATGTGTTTGCTTCGTTTTAACTTTGATAATCCTTTATTTGTCCTTTATGGGTTTGGGGAGTCTCAAACCAGTGAAAAGCTGCGAGAGATTTGATTTGCAAGTTTAG 1152 0.4392 MQGEQQRINDVVSRGAQMSIAASSMFPGFRFCPTDEELISYYLSKKLEGHEESVQVVSEVEICKYEPWDLPAKSFIQSDNEWFFFSPRGKKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHMGRAPKGERTEWIMHEYCSNDKSQDSLVVCRLKRNTEFRQNDASNRASSSQQQAVNSHESNCAISEAEIDQRGVCEQDKGVGCSSKRSSSSYDSPLTEQIDSASESNQRAFNYDAAVTESTSHQKEVDEEDCYAEILKNDIIKLDESSFPSQEAHEVRSQQDPAQELPFQGTAQRRIRLKVDKSRRRAAAGLGFASSKRPSKNTTTLFGILTNRVLLCVCFVLTLIILYLSFMGLGSLKPVKSCERFDLQV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0259 383 Pfam No apical meristem (NAM) protein 27 150 IPR003441 GO:0003677|GO:0006355
Lele12g0259 383 MobiDBLite consensus disorder prediction 210 239 - -
Lele12g0259 383 SUPERFAMILY NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
Lele12g0259 383 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 249 - -
Lele12g0259 383 MobiDBLite consensus disorder prediction 172 191 - -
Lele12g0259 383 ProSiteProfiles NAC domain profile. 25 167 IPR003441 GO:0003677|GO:0006355
Lele12g0259 383 Gene3D NAC domain 34 172 IPR036093 GO:0003677|GO:0006355
Lele12g0259 383 MobiDBLite consensus disorder prediction 173 191 - -
Lele12g0259 383 MobiDBLite consensus disorder prediction 214 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0259 Lele-ChrLele12 2241086 2242942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0259 12 286 NAC Transcription Factor Family AT2G27300 51.636 8.85e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele12g0259 NAM 4.2e-34 No_clan