Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0253 ATGGCATTTTCATTATTTGTGACCAAGAAACTCCGTCGCCGTCTTCGCTACCGTGGAGGGTTGTTCGCTGGCGAAGGACTGAAATCCTTGCTTGCTTGTCAGAGTGGTAGGAGGGAGCTTTGCGCGAAGGAAATCGGATGGCCTTCCAATGTGTGGCATGTTGCACATGTCACGTTTGATAGATTCAATGGTTTCTTGGGTTTGCCTGTCGAGTTCGAACCTGAAGTGCCCAGAAGGCCCCTAGTGCTAGATCTTCAGACTAGTGCAACTGTTTTTGGAGTTTCAACGGAATCCATTCGGTTATCATATGACTCAAGAGGGAAAATTGTGCCAACAATTCTGTTACGAATGCAGAAACGCTTATATGCTCAAGGAGGGTTGCAGGCAGAAGGGATTTTCAGAATCAATGGAGAAAATAGTCAAGAGGAATATGTTAGGGACCAATTAAATAGTGGAGTGGCTTGGTTTCGAGAGCTGCCACGGGGTGTTCTGGATTCTTTATCCCCCAAGCAGCTAACGCAGTATGAGACAAAGAAGGAATAAGCTGCCCTCTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTACTGCAGGAACATATGAACAAGATGAATGCACGCAACATTGCCATGGTTTTTGCGCCAAACATGACTCGGCACTCTGACTTTGTGGTTGCGGATGGCAGATCCTTTAACTGCATTAATGTACGCAGTCCAAGTGATGAATTTCTTAAAGACATTTGTACTAAAGACCCTCCGAGAAAGAAAGAATTTGTTGGCAGACTCTCCTCCTCAATTTCATTGAGCCTTCGGATGAGAACGGACACCATAGCCCATTTGCAATCCTGCCAGAGAGATGCTAATGAAGAAAGTGAAGATGCTCAGGAAAACTTCATTTCTGAGAAAACTATCCATGAATGTTCCCCTAACTCTCCTCACCAAACCATTAACCTAACTGGAGAAGAATCTAGCAGTTTGCTAACTTCTTCTGAGCATCTAGTTTTTGATGGAGGTTTATATTGTAAGTTTTCTCCCAAAGGAAAGGCTGGGAAGAGACCTACAATACGAGGAGAAGTGCCTGTTGAGAAGAGGGGAATTATCAGTCTCAGTCGGTTGGATTCAAGATCAGAGAGGACAGAAGCCTGGAGGTATGTGTTTACTCTTGCTCAAAGTTTATTCCTAAATGATCTTCCTTCATCTGTGTTCTGGAGTCCTCGACCGTTGTCACCTTCATCTTCGTTTCTTCCATCAACTTCACCATCATTATTAGACCAAACCTCTGTTTCATGCACCCCAGAGCGTCTTGATTTCGAGGATTCATTGCCACAAAGTCCAACTCTGCTTGAATCCCTCTCGTTCAATAAAATTAGACCTGCAAGACCAATTGATGAATGTTCGATTATTGAATTATTTGGTGAGCTTCATTTCAGTGAGAGTCCTACACCACCATCCCCTTCTTTTTCATCTGCCCCTGTTTCTAATTTTCCATCACCGGGCCTTTTTCAAAAGCCTGATCATCAAAAAGATGTTTTTGACTCAAAACAGAGCACCCCGGAATCAAACTATATCATACGTCACAAGAGTAGCGACAGTTTTTCATCTTTTAATTCTGAGAGTCTGTACTTTTGCACAGAGGGCATTGGTTTTGAAAGCTCAGATGACATGGAAGACTTGAAAGCTGAAATGGATTATTATTGTTGGGAAACTCAAAGCGAGAAAGTGAGTACCAAGAAGAATAATTTAGGTTCAGAAGATTCATATGGAGAATGCAGAAGGTCAAGGGTAAGGGGGTTAGAATACCCTCCTCCTATTTCATGCATAGGGAGCGCCGGAAAGCCTTGGGTTTGGTTTAAATCTTACAGGGACAATGGAAGATTTGTTTTGAAAGAAATAAGAATACCCACAAGGGAGTTTCTTTATGCTTATAGAGAAGATGAAAGGCTGAAGCTGCACTTTGTTCTGCCGGATGATGAGTTTCTGGAAGAACACAACGAGGAAGAAGAAGATGATGGTGTAGTTAGTATGGATGAGGAAGAAGAGAACACAGAAAAAGAAAACTTTGATTGTATAAGAGATGAGGGTAAAGAAGGCAAAGTGGAAAGTGGAGTCTTTAACAGTTTGATGACTAAGGTTTCAAATTCTTTAATCAAAGGATTAGAGAGAATGCGGCATTAG 2175 0.4253 MAFSLFVTKKLRRRLRYRGGLFAGEGLKSLLACQSGRRELCAKEIGWPSNVWHVAHVTFDRFNGFLGLPVEFEPEVPRRPLVLDLQTSATVFGVSTESIRLSYDSRGKIVPTILLRMQKRLYAQGGLQAEGIFRINGENSQEEYVRDQLNSGVAWFRELPRGVLDSLSPKQLTQYETKKEXAALLDWAINLMADVVLQEHMNKMNARNIAMVFAPNMTRHSDFVVADGRSFNCINVRSPSDEFLKDICTKDPPRKKEFVGRLSSSISLSLRMRTDTIAHLQSCQRDANEESEDAQENFISEKTIHECSPNSPHQTINLTGEESSSLLTSSEHLVFDGGLYCKFSPKGKAGKRPTIRGEVPVEKRGIISLSRLDSRSERTEAWRYVFTLAQSLFLNDLPSSVFWSPRPLSPSSSFLPSTSPSLLDQTSVSCTPERLDFEDSLPQSPTLLESLSFNKIRPARPIDECSIIELFGELHFSESPTPPSPSFSSAPVSNFPSPGLFQKPDHQKDVFDSKQSTPESNYIIRHKSSDSFSSFNSESLYFCTEGIGFESSDDMEDLKAEMDYYCWETQSEKVSTKKNNLGSEDSYGECRRSRVRGLEYPPPISCIGSAGKPWVWFKSYRDNGRFVLKEIRIPTREFLYAYREDERLKLHFVLPDDEFLEEHNEEEEDDGVVSMDEEEENTEKENFDCIRDEGKEGKVESGVFNSLMTKVSNSLIKGLERMRH 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0253 724 CDD RhoGAP 111 235 - -
Lele12g0253 724 Pfam Fantastic Four meristem regulator 599 652 IPR046431 -
Lele12g0253 724 SMART PBD_5 45 79 IPR000095 -
Lele12g0253 724 MobiDBLite consensus disorder prediction 663 691 - -
Lele12g0253 724 MobiDBLite consensus disorder prediction 479 515 - -
Lele12g0253 724 PANTHER MKIAA1688 PROTEIN 28 235 IPR044785 GO:0005096
Lele12g0253 724 CDD CRIB 43 77 - -
Lele12g0253 724 Gene3D Rho GTPase activation protein 78 228 IPR008936 -
Lele12g0253 724 SUPERFAMILY GTPase activation domain, GAP 89 225 IPR008936 -
Lele12g0253 724 SMART RhoGAP_3 108 249 IPR000198 GO:0007165
Lele12g0253 724 MobiDBLite consensus disorder prediction 663 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0253 Lele-ChrLele12 2220678 2227066 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1062 09 19835665 19838550 Lele12g0253 12 2220678 2227066 hybridization