Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0239 ATGGCTGAAGAACATCGATGCCAAGCTCAACGCCTGTGCGCTAACAACTGCGGCTTCTTTGGTAGCCCGGCGACGCAAAACCTATGTTCCAAGTGCTACCGAGATTTGCAGCTCAAGGAACAGCAATCCTCCTCTGCCAAATTGGTTCTCAACCAATCCCTTGCTCCTCCGGCTTCGACGACCTCGCAATCGTCTTCTTCGCCTGAAATGATTGACGGAACTTCGTCGCCCTCTGCGGCGTTCGATCCCCCACGCACAGCGGACGAGGTCAAGACTGGATCTTCGGCGCAGCCACCGGCTCAGCCGAGCCGGTGCATGACTTGCAGGAGGCGCGTGGGGCTAACAGGATTCAAGTGTAGGTGCGGATCAACATTTTGTGGGTCTCACCGGTACCCGGAACAGCACGGATGTGAGTTCGACTTCAAGGGGATGGGTAGGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGGCGTAAAGCTGGAGAAGATCTGA 495 0.5677 MAEEHRCQAQRLCANNCGFFGSPATQNLCSKCYRDLQLKEQQSSSAKLVLNQSLAPPASTTSQSSSSPEMIDGTSSPSAAFDPPRTADEVKTGSSAQPPAQPSRCMTCRRRVGLTGFKCRCGSTFCGSHRYPEQHGCEFDFKGMGREQIAKANPVVKGVKLEKI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0239 164 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Lele12g0239 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Lele12g0239 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Lele12g0239 164 SUPERFAMILY AN1-like Zinc finger 92 158 IPR035896 -
Lele12g0239 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Lele12g0239 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 10 164 - -
Lele12g0239 164 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Lele12g0239 164 MobiDBLite consensus disorder prediction 44 74 - -
Lele12g0239 164 Gene3D - 1 69 - -
Lele12g0239 164 Gene3D - 77 160 IPR035896 -
Lele12g0239 164 FunFam Zinc finger AN1-type containing 6 81 160 - -
Lele12g0239 164 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Lele12g0239 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
Lele12g0239 164 MobiDBLite consensus disorder prediction 44 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0239 Lele-ChrLele12 2090643 2091137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0239 1 164 C2H2 Transcription Factor Family AT3G52800 54.706 1.38e-49 155