Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0230 ATGAACGGTGAAAGCCGAAGATGGGACCGCAAAGACTCCCGCAGAGGCACAGCCAAGAAGCACAAGCTAATCCGCAACGCTGAAGAAGAACTCGAGTCTAAATTAGGGTTCGATCTTTTCTCAGAAGGCGAAAAACGACTTGGATGGTTGCTAAATTTTTCATCCTCATCTTGGGAGGATGAAGATACACACAAAGTCCATAGTTGTGTAGATCTTTACTTTGTTACACAGGATGGTTCTACGTTCAAGTCAAAATACAGATTTCAGCCTTATTTTTATGTGGCTTCAAAGGATAAAATGGAGATGGAAGTTGAAGCATATCTAAGACGGCGTTATGAAAGTCAGATTGCAGATGTTGAAATAAAAGAAAAGGAAGACCTTGATCTTAAAAATCATTTGTCTGGATTACAAAAATCTTATTTAAAGTTATCCTTTGATACCGTGCAACAATTGATGAATGTGAAGAGTGACCTGATGCATGTTGTTGAAAGAAATCAGGCAAAATCTGATGCAGCAGAAGCTTATGAATCCATAATAACTGGAAGAAGGGAGCAAAAATCTCAAGATTTTTTAGATTATATAATTGATCTTCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGATAATGATATTCGATGTGGCCAATGGTATGATGTTAGTGTGTCCAATACTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCTGAAGTTCGTATTTGTGCTTTTGATATAGAGACCACAAAACTTCCATTAAAGTTCCCTGATGCTGACTATGACTTAATTATGATGATTTCATACATGGTAGATGGACAAGGGTATTTGATCATAAATAGAGAGTGTGTTGGGGACAACATAGAGGATTTGGAGTATACTCCAAAACCAGAGTTTGAAGGATGTTTTAAGGTGACAAATGTTCAAAATGAGGTTGATCTTCTTAGATTGTGGTTTTCTCATATGCAAGAGGTGAAACCTAGTATATATGTTACATATAACGGTGACTTCTTTGATTGGCCATTTGTGGAAAGAAGGGCAGCTCATCATGGGTTCAAAATGCGTGATGAGTTGGGTTTTCAATGTGACAATGATCAAGGGGAATGTCGCGCTAAATTTGCTTGCCATCTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTTCCTCAGGGGAGTCAAGGCCTGAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCCCTAGAGGTGAATCCTGAGGACATGGTTCGCTTTGCAAAGGAAGACCCTCAGATGATGGCCTCTTATTCCGTTTCTGATGCTGTGGCAACTTATTACTTGTACACAACCTATGTCCATCCCTTTATTTTTTCTCTGGCAACAATTATACCCATGTCACCAGATGAGGTTTTGCGTAAAGGTAGTGGGACCCTCTGTGAAATGTTGCTCATGGTCCAGGCATATAAGGCTAATGTGATATGCCCTAACAAACACCAGTCTGATCCTGAGAAATTTTACAACAATCACCTTCTTGAGAGTGAGACATACATTGGTGGCCATGTGGAATGCCTTGAAAGTGGTGTTTTTAGATCTGATCTTCCAACTAGTTTTACCCTTGAACCTTCAGCATATGAGCAATTGATCAACAACCTTGATCGAGACCTGCAATATGCTATAAGAGTAGAGGGTAAGATGGACTTGGATTCCATCTCCAATTATGATGAAGTTAAGAATGCTATCATGGAAAAGCTTATAAAATTGCGAGACAAGCCAATATGTGAAGAATGCCCACTCATTTATCATTTGGATGTAGCTGCTATGTATCCAAACATAATCTTAACAAACCGGCTTCAGCCACCTTCAATAGTTACAGATGAGGTCTGCACTGCATGTGATTTCAACCGTCCTGGAAAGACTTGCCTTAGAAAACTTGAGTGGGTTTGGCGTGGAGAAATTTTCATGGCAAAGAAAAGTGATCATTATCATTTAAAGAAGCAGATTGAGTCAGAGTTTGTTGAAAGTTCTGATAGGCAGTCAGCTACATCATTTCTTGAGCTGCCCAAGTCAGAGCAGCAATCCAGGCTAAAAGAACGTCTAAAGAAATACTGCCAGAAGGCATACAAACGGGTACTTGATAAACCAGTAACTGAACTTCGTGAAGCAGGGATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTTCGGGATAGAAGATATGAATACAAAGGCCTTAATAAGGTTTGGAAGGGAAAGTTGTCTGAAGCCAAGGCCAGTGGAAATTCTATTAAGATCCAAGAAGCACAGGACATGGTTGTGCTTTATGATTCATTGCAACTTGCGCACAAGTGTATTCTTAATTCCTTTTATGGATATGTCATGCGCAAGGGGGCAAGATGGTACTCCATGGAAATGGCCGGAGTTGTTACATATACTGGTGCAAAAATAATTCAGAATGCCCGCTTGCTTGTTGAGAAAATAGGAAAGCCACTTGAATTAGACACGGATGGTATTTGGTGTGCACTTCCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAAAGACTCAAAGAGGAAATTTACTATTTCATACCCTTGTGTCATGCTTAACGTTGATGTGGCAAGGAATAATACAAATGATCAGTATCAGACACTCAATGATCCAGTAAGGAAAACTTATACAACTCACAGTGAATGCTCTATTGAATTTGAAGTTGATGGACCATACAAGGCAATGATCCTTCCAGCTTCCAAAGAAGAAGGAATTCTAATTAAGAAGCGTTATGCTGTTTTTAACGATGACGGAACGCTAGCAGAGCTGAAAGGTTTTGAGATCAAGCGGAGAGGTGAACTGAAGCTAATAAAAGTTTTCCAGGCAGAGCTTTTTGACAAGTTTCTCCATGGGTCAACCATAGAGCAATGTTATTCAGCAGTAGCTACTGTGGCAAACCACTGGCTTGATCTTCTTGATAACCAAGGAAGGGATATTGCAGATAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTATGGTGAGCAGAAGTCCTGTGCTGTTACCACTGCTAAACGGCTTGCTGACTTTCTTGGTGATGCAATGGTCAAAGATAAAGGCCTCCGCTGTCAGTACATAGTAGCATGTGAACCTAAGGGAACACCTGTAAGCGAGCGTGCTGTTCCTGTGGCAATATTTGAAACTGATGCGGAGGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCAGCTGATGTTGGCATTCGATCCATAGTTGATTGGTCCTATTATAGGCAACGGCTGAGCTCTGCAATTCAAAAAATTATCACCATTCCTGCTGCAATGCAGAAGGTTGCAAATCCTGTCCCTAGGGTGGTTCATCCTGATTGGTTGCACAAAAAGGTTCGGGAGAAGCAGGATAAATTTCGCCAACGAAAATTAGTTGATGTCTTTAATTGCATGAACAGGGATGAACTCTCTAAAAAGCAAAGTAATTCTGATAATGTCTGCCATGTTATGAATGAAGAGGCTATTAGTGACTTGGAGGATTTTGGTAACAAGACTAGGAATAATATTAGTGGACCTAGACCAATTGTACGACATTATGAAGCTAATAATGAACAGCACTCAGTGAAGCATTATGACAAAGAAGATTCTGAGCAAAAACATAATGATCATGGTAGTGAGCGCCAGCCACTAGCACAGTTAGGACACAATGGATTGTCATCTGAAAATGTTGACAAAACAGTAGATTACCAAGGATGGCTCCAGTCAAAGAAGAGAAAGTGGAAAGATATAATAGCAAGAAGAAAGAAGCAAAGATTGGAGAATTCAAAGAAATCAGACCGTGCTAATAGCAGTCTTGAAAAACTGGCAAATAAGATAGATCATAAAGCCCAAGGTAGAAGTAATGTTGATTCATATTTCAGAAGGCACGAGGTAGTACTGACACGGTCCCATTGGCAGATAATACAACTAATTCACAGTTCACAGATGGACCACATTTTTGCTTGGGTTGTTGTCGATGGGGTTATGCTTAAGATTCCAGTTTCTGTTCCTAGGGTCTTTTACCTCAATTCTATGTCACCAATTACTGAGCAGTTTATGGGTAAACGTGTAAATAAGACTCTTCCACATGGAAGGCATAGTTATAACCTGTATGAGGTTACAATTAATGAAGTTCAATTTAAAGAAACAAGCAGAAAGCTTGCAGCTCTTCTGGCAGATCCTGACATTGAGGGAATATATGAAACAAAAGTGCCACTGGAGTTTAATGCCATAGTCCAGCTTGGTTGTGTATGCAAGGTGGACAAAACTGCTAAAAAACGTAGTCTTCAGGAACCTTGGAATCTGAGTGAATTGCACATGAAGACCACCACAGAATGCTCTTATCTTGAACAATCCATATCCTTCTTTTACTTGTATCAGAGCATCTCTGAGGGGCGGGCTATATATGTTGGATATTTTCCTGCATCAAAAGCAATTTCTGTTGTGGTAGTTAATCCGTATCAAAACAAGGACTTATCTCCGGTATTTCTTGAAAGACAATTCCGTGATGCTTGTGAAGCTTTGTCTATTGAGACACCTCCCAGAAATGGTATTAGATTTAAGGTGGACTATGTTTTGCATGTCAAGGATGCTGAAACGATGATGCAAAGAGTGATAAATGATCAAAGGAATGAGCATCATGGGCCTATGGTTGCTGTCATTGAATGTCCAAATCCCCAACTAATGAAATTGGCTATTCGAGCTCTAGATGATTTTCCATGCCTGAACATTCCTTCTAATGCACGTGATAGTCAGTACCAGATTCTTGGATGGCAACAAGTTGCTGCAAAAACTGGAATGCATCGGTGTGCTGCTTCGGTCCAGTGGCTAAATGAGAGAATCTCTCTCTCAAGATATGCTCATGTACCATTAGGGAATTTTGAACTTGACTGGCTCATATTTACAGCAGATATCTTCTTTTCTAGAGCATTGAGGGATAATCAACAGGTACTTTGGATATCTGATGATGGGCTTCCTGATTTAGGCGGAATTAATGAAGAAGAGACATGTTTCGCTGATGAGGTCCACCAACCTGTTCTTACCTACCCTGGAGCTTACAGAAAAGTTACAGTAGAGCTAAAGATTCACCACCTGGCCGTAGATGCTCTTTTAAAAAGCAACCAAGTCAATGAGTTGGAAGGAGGTGCTTTGTTAGGATTTGATCATGACATAAACTCTGGACCATTTGGCATAAATGATCAGAATGGCATTGATGAGGCCACCTCATGTGCACGTGCTTTTCGAGTCCTAAAGCAGTTAATCCAACGGTGCCTTGCAGATGCAGTTACTTCTGGAAATGTATATGCTGATGCAATATTGCAACATCTATATCGATGGCTATGCAGCCCTCAATCAAAATTTCATGATCCAGCTCTTCACCGACTACTCCACAAGGTCATGCAGAAGGTTTTTGCATTATTGTTGGCGGAGCTCCGTAAATTGGGCGCATCAATTGTTTTTGCAAACTTCTCAAAAATAATTGTAGACACGGGAAAATATGATTTGTCTACAGCCAAAGCCTACTGTGATAGTTTGTTACGAACTCTACAATCTAGAGATTTATTTGAATGGATTGAACTTGAACCGCTTCAGTTTTGGAACTCGTTGCTATTCATGGATCAGTATAATTATGGGGGAATACCAGCAAAGTCTGATGAAGTTGTAAATGATGAATCTCAAGTTGACATTATATCGAGTTGGAACATTGCCGAATACTTACCGAAGAAAATCCAGGACCACTTTGTTTTCATTGTTTCTCAATTCATGTACATTCCCTGGAACTATATACAAAGACAAGCTGCAATACCGGCTTCATCACAAAATGGCGACTCCTGCACCCCATCAATCACTATTGGAGCTGCAGAGAAATTTGAATCCCATGTGACAGAATATATTAAAGAACAGATCAGCTCTTACTTCACAGACAAACTTCTGGGAATTGTTGGCGATATTATGCATCATATGAAGGAGATAAGACTAGAAAACGACCAGAATGTATCGTCCAGCAATCCTCAGCTTGCAGCTCATTTCCACAAAGGGGATGCAGCCTTGGAATTTATCAAGCATGTTTGTGCCGTCCTTGCCCTGGACCAGAGTGTGCAGCATGATGTTCTGGTCATGAGAAAGAATTTGTTGAGATTTGTTCGTGTCAGGGAGTTTGCACCAGAAGCTGAGTTTCGTGATCTGAGTCATTCGTTCATATTATCCAATGTCATCTGCAGCTACTGCAATGATTGCAGAGATTTGGATTTGTGCCGCGACTCAGCTTTATCAAGTCAGGAGTGGCATTGTGGCGTGCCGCAGTGTGGGCAGCCATATGATCGGGAGGTGATGGAAAATGCACTTCTTCAGATTGTACGACAGAGAGAACGACTATACCACTTGCAAGATCTGGCGTGTGTGAGATGCTACCAGGTGAAAGCTGCTCATTTAGCTGAGCAATGTGCTTGTGCTGGTTCATACAAGTGCAAGGAAGATAGAACTGAATTTCGCAATAAGATGCAGGTTTTCTACAACATTGCTGTTCGCCAAAAATTCCAACTCCTTCAAGAATGCACCTCATGGATTCTAGAATTGAGATAG 6651 0.4052 MNGESRRWDRKDSRRGTAKKHKLIRNAEEELESKLGFDLFSEGEKRLGWLLNFSSSSWEDEDTHKVHSCVDLYFVTQDGSTFKSKYRFQPYFYVASKDKMEMEVEAYLRRRYESQIADVEIKEKEDLDLKNHLSGLQKSYLKLSFDTVQQLMNVKSDLMHVVERNQAKSDAAEAYESIITGRREQKSQDFLDYIIDLREYDVPYHVRFAIDNDIRCGQWYDVSVSNTGVTLEKRTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLIINRECVGDNIEDLEYTPKPEFEGCFKVTNVQNEVDLLRLWFSHMQEVKPSIYVTYNGDFFDWPFVERRAAHHGFKMRDELGFQCDNDQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEDPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDLPTSFTLEPSAYEQLINNLDRDLQYAIRVEGKMDLDSISNYDEVKNAIMEKLIKLRDKPICEECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDHYHLKKQIESEFVESSDRQSATSFLELPKSEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDSKRKFTISYPCVMLNVDVARNNTNDQYQTLNDPVRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEQCYSAVATVANHWLDLLDNQGRDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSADVGIRSIVDWSYYRQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKQDKFRQRKLVDVFNCMNRDELSKKQSNSDNVCHVMNEEAISDLEDFGNKTRNNISGPRPIVRHYEANNEQHSVKHYDKEDSEQKHNDHGSERQPLAQLGHNGLSSENVDKTVDYQGWLQSKKRKWKDIIARRKKQRLENSKKSDRANSSLEKLANKIDHKAQGRSNVDSYFRRHEVVLTRSHWQIIQLIHSSQMDHIFAWVVVDGVMLKIPVSVPRVFYLNSMSPITEQFMGKRVNKTLPHGRHSYNLYEVTINEVQFKETSRKLAALLADPDIEGIYETKVPLEFNAIVQLGCVCKVDKTAKKRSLQEPWNLSELHMKTTTECSYLEQSISFFYLYQSISEGRAIYVGYFPASKAISVVVVNPYQNKDLSPVFLERQFRDACEALSIETPPRNGIRFKVDYVLHVKDAETMMQRVINDQRNEHHGPMVAVIECPNPQLMKLAIRALDDFPCLNIPSNARDSQYQILGWQQVAAKTGMHRCAASVQWLNERISLSRYAHVPLGNFELDWLIFTADIFFSRALRDNQQVLWISDDGLPDLGGINEEETCFADEVHQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNELEGGALLGFDHDINSGPFGINDQNGIDEATSCARAFRVLKQLIQRCLADAVTSGNVYADAILQHLYRWLCSPQSKFHDPALHRLLHKVMQKVFALLLAELRKLGASIVFANFSKIIVDTGKYDLSTAKAYCDSLLRTLQSRDLFEWIELEPLQFWNSLLFMDQYNYGGIPAKSDEVVNDESQVDIISSWNIAEYLPKKIQDHFVFIVSQFMYIPWNYIQRQAAIPASSQNGDSCTPSITIGAAEKFESHVTEYIKEQISSYFTDKLLGIVGDIMHHMKEIRLENDQNVSSSNPQLAAHFHKGDAALEFIKHVCAVLALDQSVQHDVLVMRKNLLRFVRVREFAPEAEFRDLSHSFILSNVICSYCNDCRDLDLCRDSALSSQEWHCGVPQCGQPYDREVMENALLQIVRQRERLYHLQDLACVRCYQVKAAHLAEQCACAGSYKCKEDRTEFRNKMQVFYNIAVRQKFQLLQECTSWILELR 2216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0230 2216 CDD DNA_polB_epsilon_exo 242 445 - -
Lele12g0230 2216 Pfam Domain of unknown function (DUF1744) 1535 1903 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Lele12g0230 2216 MobiDBLite consensus disorder prediction 1221 1236 - -
Lele12g0230 2216 CDD POLBc_epsilon 505 1124 - -
Lele12g0230 2216 SMART DUF1744_2 1519 1903 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Lele12g0230 2216 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 18 2214 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Lele12g0230 2216 SMART polmehr3 241 844 IPR006172 GO:0000166|GO:0003676|GO:0003887
Lele12g0230 2216 MobiDBLite consensus disorder prediction 1278 1302 - -
Lele12g0230 2216 Gene3D - 943 1127 IPR042087 -
Lele12g0230 2216 Gene3D Palm domain of DNA polymerase 755 939 IPR023211 -
Lele12g0230 2216 FunFam DNA polymerase epsilon catalytic subunit 943 1127 - -
Lele12g0230 2216 SUPERFAMILY Ribonuclease H-like 58 469 IPR012337 -
Lele12g0230 2216 Pfam DNA polymerase family B, exonuclease domain 76 402 IPR006133 -
Lele12g0230 2216 MobiDBLite consensus disorder prediction 1221 1252 - -
Lele12g0230 2216 Pfam DNA polymerase family B 758 1067 IPR006134 GO:0000166|GO:0003677
Lele12g0230 2216 FunFam DNA polymerase epsilon catalytic subunit 758 939 - -
Lele12g0230 2216 SUPERFAMILY DNA/RNA polymerases 488 1117 IPR043502 -
Lele12g0230 2216 MobiDBLite consensus disorder prediction 1 21 - -
Lele12g0230 2216 FunFam DNA polymerase epsilon catalytic subunit 242 470 - -
Lele12g0230 2216 FunFam DNA polymerase epsilon catalytic subunit 58 229 - -
Lele12g0230 2216 Gene3D DNA Polymerase, chain B, domain 1 52 233 - -
Lele12g0230 2216 Gene3D - 240 470 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0230 Lele-ChrLele12 1972084 1999808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0230 1 2106 Core DNA Replication Machinery Family AT1G08260 71.084 0.0 3070