Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0229 ATGTCAAGCATCAAGGAAGACAAAAATAAAGAAGCAGCAGAGGCTAGACGAACAGTGGAAGAAGATAGTTATACATATACCCGTCCCCAAATTCTTGGCCACCCTCCTACGAAAAAAGAGCAGCTGCGCAACCCCCCATCACTTGAAGCAAAGATGAAGGTAATAGCTGCGTATTTGCTGGCTGTATTGGGAGGGAATTCAGCCCCTACCGCAGACAATCTGAAGCGCATCCTTAGCTCAGTTGGAGCTGAGATTGATGATGAAAGGATCGAGTTGCTTTTTTCTGAAGTCAATGGTAAAGACATCACGGAGCTAATTGCTAGCGGAAGAGAGAAGTTGGCTTCAGTACCCGGTGGCGGTGGTGCAGTTGCAGTTGCTGCTGCACCTGCAGCTGGTGCTGCTGCACCTGCTGCCGAGGCTAAGGAAGAAAAGAAGGTGGAAGAGAAGGAGGAGTCCGATGATGCTTATAGCATCATCGTTGAAGCTTCTTTTGCCATCGCTGAAGGTTTGACGTCGTTGAAGCTTTCGTACTAG 534 0.485 MSSIKEDKNKEAAEARRTVEEDSYTYTRPQILGHPPTKKEQLRNPPSLEAKMKVIAAYLLAVLGGNSAPTADNLKRILSSVGAEIDDERIELLFSEVNGKDITELIASGREKLASVPGGGGAVAVAAAPAAGAAAPAAEAKEEKKVEEKEESDDAYSIIVEASFAIAEGLTSLKLSY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0229 177 MobiDBLite consensus disorder prediction 1 45 - -
Lele12g0229 177 CDD Ribosomal_P2 52 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele12g0229 177 Pfam 60s Acidic ribosomal protein 69 155 - -
Lele12g0229 177 Hamap 50S ribosomal protein L12 [rpl12]. 53 154 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele12g0229 177 FunFam 60S acidic ribosomal protein P2 49 110 - -
Lele12g0229 177 MobiDBLite consensus disorder prediction 1 23 - -
Lele12g0229 177 Gene3D - 51 110 IPR038716 -
Lele12g0229 177 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 52 156 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0229 Lele-ChrLele12 1966161 1969560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0229 52 121 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 72.857 1.08e-29 103