Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0228 ATGGCAGCCCAACAAGGGTCCGATGATGGCGCGTGGGGTTTAGTAGTGGAGGCGAGTGGGAGTGAAGCGAGGCGGGCAGAGGTTGAGTTAGTTAAGGTGGTTGATTCGGAGCCGGAGCTTGTGCTCCGTTTGATATCGGTGGCGGAGGTGGTGGAGGCGAAGCTGAGGCTATTGAGGTCGTCGGATAGTTCGTCGAGCCACGTCTCCATTGTGAATGACCGGAAGGGCGTCAGCGAGAGAGGAGAGATTATGGGGTTGGGGGGCTGCTTGGTGTCTCGAGATCTTCGGCTTCATTCAGAGATGACGGAACCACCCTTCAGACCACGTGAGCAACTTCTTGAGAAGCAAAGACATTTTCAGAACATACATAAGCACACCTACTTGAAAGGGCCATATGACAAGATCACCTCTGTCGCCATACCACTTGCATTGGCAGGAGCTTCACTCTATATGATTGGACGAGGTATCTACAATATGTCGCTTGGAATAGGAAAGAAAGAATGA 504 0.5198 MAAQQGSDDGAWGLVVEASGSEARRAEVELVKVVDSEPELVLRLISVAEVVEAKLRLLRSSDSSSSHVSIVNDRKGVSERGEIMGLGGCLVSRDLRLHSEMTEPPFRPREQLLEKQRHFQNIHKHTYLKGPYDKITSVAIPLALAGASLYMIGRGIYNMSLGIGKKE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0228 167 Pfam Cytochrome c oxidase subunit VII 112 162 IPR039297 -
Lele12g0228 167 PANTHER CYTOCHROME C OXIDASE SUBUNIT 7 97 167 IPR039296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0228 Lele-ChrLele12 1948347 1953815 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1218 31 18533901 18539851 Lele12g0228 12 1948347 1953815 CCT
Lele32g0312 32 1937487 1938568 Lele12g0228 12 1948347 1953815 CCT
Lele09g1092 09 20085750 20087638 Lele12g0228 12 1948347 1953815 hybridization