Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0225 ATGCAGGTTTACAGAGGCCTGGATGTTCTCACCAATAAAGTTCCACTCTCGGACCAAAATGGGGTGCCTCACCATCTTCTGGGTACTATAAGCCCAAACGTGGAATTCACAGCTAAAGAATATCGAGATTCTGCTATCCCTCTCATCAATGGCATATCTGCTCGCAACAACTTGCCTGTCATAGTTGGGGGTACGAACTATTTCATCCAGGCTCTCGTGAGTCCATTCCTCCTAGATGAGTCAGTTGAAGATATGGATGAAACCTGCATGGACAATCTCTCTGGTACTACTCCATTGGATGAGAGTTTAATCCCTGAAAAGGGCAGTTCAAACAATAATTATGATTTTCTTAGAGACATTGATCCAGTGGCAGCAAATAGAATGCATCCAAATAACCATAGAAAGATTAGTCAATACCTTAATTTGTATGCTCGCACCGGAGTTCTTCCAAGCAAAGTTTTCCAGGGAAAAGCTGCAGAGGTTTGTTAG 489 0.4294 MQVYRGLDVLTNKVPLSDQNGVPHHLLGTISPNVEFTAKEYRDSAIPLINGISARNNLPVIVGGTNYFIQALVSPFLLDESVEDMDETCMDNLSGTTPLDESLIPEKGSSNNNYDFLRDIDPVAANRMHPNNHRKISQYLNLYARTGVLPSKVFQGKAAEVC 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0225 162 Gene3D - 99 157 - -
Lele12g0225 162 Gene3D - 1 75 IPR027417 -
Lele12g0225 162 Pfam IPP transferase 2 155 - -
Lele12g0225 162 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 83 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0225 Lele-ChrLele12 1910570 1911913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0225 1 160 C2H2 Transcription Factor Family AT2G27760 56.098 1.18e-63 200