Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0213 ATGGAGGACCGAACGATCACGGTCATCAACTCTCCGACCGAAACACCAGGGAACCCGGTGATGAAGGGCGGCGACGACGACGTGCCTAATGTAGTGGGAGCTGTCGGAGTTGAGCCAGCCCTGAACTCTACCCCAACTGTTGGAGGAGGAACTAACGACGATGGGGGTTCGGAAATAAAGGTAAAGAAACGAAGAGGGAGGCCTCGGAAGTACGGCATAAATGGGAATCCGTTTTCCCCGGCGTCTGCGCAGTCACGATTTCCCAGTTACTCATTCGGGAGCTCTGTGAAGCGAAGTAGAGGAAGGCCTCGTGGTTCAGGAAAACTCCAAGTTTTGGCATCCATTGGTGGAGTTGTTGCAGACACTGCTGGGGGAGGCTTCACTCCTCATGTTGTCACTGTGAATACCGGCGAGGATGTGGTGAATACAATATTATCATTTTCTCAGAAAGGTCCTCGAGCTGTCTGCGTCCTTTCTGCTACTGGTGCAGTTTCCAGTGTCATCATTCGCCAATCTGGTGCTGTTAGGAGATTTGAGGGCCGCTTCGAGATTTTATCATTAACTGGATCATATACAGTGGCTGCGCGTCGCAGAACTGGCATGTTCAACGTTTCTCTGGCTAAACCTGATGGCAGGGTCTTTGGTGGTGGGGTTGAGGGCTCATTGATAGCTGCTGGACCTATTCAACTAATAATGGGCAGTTTCAAACCAAATATCAGTAAGGAGATTCAAAGGAGACATTCAACTATGTCTCCTTCTCTTCCAGACATGCCTGGTCATCATGAAATGGTAGAAAGTGAACAGGACGAGCCTGTGCCGACAACTAATGGACTATTCGACAACTTCAATCATGGAACAAGCAATGGAATAGCGGACGATGTGGTTCCTGCAAATCAGAATATGCTCTCTGCCTCTTCAAATGGTATTAACATGGACTCTCAGCACATCTCAGGCCATGAAGAGCCCACAGATATGGGGATGAGCGAGCCCCATATATGA 999 0.4945 MEDRTITVINSPTETPGNPVMKGGDDDVPNVVGAVGVEPALNSTPTVGGGTNDDGGSEIKVKKRRGRPRKYGINGNPFSPASAQSRFPSYSFGSSVKRSRGRPRGSGKLQVLASIGGVVADTAGGGFTPHVVTVNTGEDVVNTILSFSQKGPRAVCVLSATGAVSSVIIRQSGAVRRFEGRFEILSLTGSYTVAARRRTGMFNVSLAKPDGRVFGGGVEGSLIAAGPIQLIMGSFKPNISKEIQRRHSTMSPSLPDMPGHHEMVESEQDEPVPTTNGLFDNFNHGTSNGIADDVVPANQNMLSASSNGINMDSQHISGHEEPTDMGMSEPHI 332
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0213 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 236 IPR005175 -
Lele12g0213 332 MobiDBLite consensus disorder prediction 1 17 - -
Lele12g0213 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 241 - -
Lele12g0213 332 CDD DUF296 128 235 IPR005175 -
Lele12g0213 332 MobiDBLite consensus disorder prediction 1 107 - -
Lele12g0213 332 ProSiteProfiles PPC domain profile profile. 124 257 IPR005175 -
Lele12g0213 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 42 298 IPR039605 GO:0003680
Lele12g0213 332 MobiDBLite consensus disorder prediction 77 96 - -
Lele12g0213 332 Gene3D - 129 252 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele12g0213 Lele-ChrLele12 1764586 1766711 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0213 61 245 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 47.115 2.75e-50 169