Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0211 ATGCCCTCATTTCTTTATATTAATTCACCTGACAAAAGACGCGGTTTCAGCATTCGATGTGTCGGATCAGAAGCCGTGACGAAGACCATCACTGGGTTGGATGAGTCCAAATTTGATAATGGCTCTGAACCCTTAATTGATCGGCATGGTGGGGATAGAGGTGGTTCTGGTGACGGTAGTGGGGGGACTGGCGGCGGCGGCGGTAATGAGGACGGTGGTAGAGATGAAAATGAGGAAGAGTTCGGGCCGTTATTGAAGTTTGTGGATGTTATGAAAGTCGCAGAAGATCGGGGCGTGAAGCTGCCTTTGGATATAGCGGAGGCAGCGAAGACAACAGGAATTCGGGAAATGTTCCTTCTTCGTTACTTGGAGTTACAGGGTTTGGTTTGGCCACTGGGTTTTTTGATGAAGCATTGTTCTATGCTTCGAAACCGAATGCTAGCTGATCCTTCTTTTCTATTTAAAGTTGGAACAGAGATTGGTATAGATTCTTGTTGCGCAACATTTGCCGAAGTTCAGAAAAGAGGCAAGGATTTTTGGGCAGAATTTGAGTTGTATGCGGCCGATCTACTGGTTGGGGTGGTTGTTGACATTGCTTTAGTTGGCATGTTAGCACCCTATGCTCGACTTGGGACGCCATCAACGTCCAGAGGTTTGCTTGGACGCATTCAACATGCTTGCGCTGCCCTTCCTAGCAGTGTTTTTGAAGCTGAAAGGCCAGGCTGCAAGTTCTCAGTGATGCAACGCATTGCAACATACTTTTATAAGGGTGCATTGTATGGATCAGTTGGGTTTGGATGTGGCCTAGTTGGTCAAGGAATTGCAAATATGATAATGAATGCCAAAAGGAAGTTTAAGAAATCTGAAGAGGACATACCTGTGCCTCCTCTTGTTCAAAGTGCTGCTCTCTGGGGTGTGTTCCTTGCCGTGTCATCTAACACTCGATATCAAATTGTGAATGGACTGGAAGGCCTTGTGGAAGCTTCTCCTGTGGCAAAGAAGCTTCCACTCGTCGCTATGATGTTCACGGTATGCGTGCGATTTGGCAACAACATATACGGTGGTATGCAGTTCGTAGACTGGGCCAAATGGAGTGGGGTGCAATAA 1107 0.4688 MPSFLYINSPDKRRGFSIRCVGSEAVTKTITGLDESKFDNGSEPLIDRHGGDRGGSGDGSGGTGGGGGNEDGGRDENEEEFGPLLKFVDVMKVAEDRGVKLPLDIAEAAKTTGIREMFLLRYLELQGLVWPLGFLMKHCSMLRNRMLADPSFLFKVGTEIGIDSCCATFAEVQKRGKDFWAEFELYAADLLVGVVVDIALVGMLAPYARLGTPSTSRGLLGRIQHACAALPSSVFEAERPGCKFSVMQRIATYFYKGALYGSVGFGCGLVGQGIANMIMNAKRKFKKSEEDIPVPPLVQSAALWGVFLAVSSNTRYQIVNGLEGLVEASPVAKKLPLVAMMFTVCVRFGNNIYGGMQFVDWAKWSGVQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0211 368 Pfam Protein RETICULATA-related 144 322 IPR021825 -
Lele12g0211 368 PANTHER EXPRESSED PROTEIN-RELATED 27 368 - -
Lele12g0211 368 MobiDBLite consensus disorder prediction 32 78 - -
Lele12g0211 368 MobiDBLite consensus disorder prediction 40 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0211 Lele-ChrLele12 1742046 1744547 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0211 12 1742046 1744547 Lele30g1095 30 14078160 14081316 CCT
Lele12g0211 12 1742046 1744547 Lele32g0298 32 1862052 1865108 CCT
Lele09g1108 09 20258469 20260839 Lele12g0211 12 1742046 1744547 hybridization
Lele10g1076 10 22116462 22121405 Lele12g0211 12 1742046 1744547 hybridization