Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0205 ATGCCTCGCCGCGGTAGCAGAAAGCAACCTGAAGTTCGGCCGCTTCAACCGTCTCCAGCTCCATCCCAATCTGCCCCGGGTCAAAATGTTGCTCGAGGCGGGTCACAGGGGGGACTCGGGCGTGGTGCTCCCTCTTCATCGGTAGCGTCTGCTCCTCCGACTTCGGCCATTACTACAGATGCTCCTCCGAGTGATTTGTTGGCCCAGATGACGTTGCAGTCTACGGCGCCTTCGTCGTCAAAGGCCATGAGATTTGCCGACCGACCTGATTTTGGTAGAATGGGGAAAAAAATTCAAGTTCGTGCGAATCACTTTCTCGTTGATGTTGCTGATAGAGATCTTCATCACTATGATGTATCCATATCTCCAGAAATTACCTCCAAACAGATCAGTAGGAATGTGATGAATCAACTAGTCCAGTTGTACCGAGAGTCACATCTCAACAAACGAATACCAGCTTATGATGGCCGGAAGAGTCTCTTCACGGCGGGCCCTTTGCCCTTCTTGTCAAAGGAATTTGTGGTCAAGCTGGTCGACAGCGATGAACATGGAAGTTCTTCTGCTTCAACAAAGAAGAAACGTGAGCGCGAGTTTAAGATCACTATTCGTTATGCTTCTAAGGCTGATCTTCATCATCTGCAGCAGTTTCTAAGGTGTCAACAGCTGGACAATCCACAAGAAACTATTCAAGCCCTTGATGTTGTGCTGAGGGCATCGCCATCTGCAAAGTATACTGTTGTCGGGAGATCTTTTTTCTCACCAAGTTTGGGTCAAACTGGCGAGCTTGGTGATGGAATAGAATACTGGAGAGGATATTATCAAAGCCTTCGCCCGACTCAAATGGGACTTTCACTTAATCTTGATGTATCAGCAAGGGCGTTTTATGAAAACGTTTTTGTGACTGAGTTCATTGCAAAACATTACAATTTTAATTTTTCAAGGCGTCTATCTGACCAAGATAGAATTAAGATTAAGAAAGTATTGAGAGGAGTAAAGGTAGAATTTACTAATGGTCAGTGTACCAGAAGTTACAAAATTACTGGTGTCTCGAAGGAACCACTGGGCGAGTTGACGTTTACTCTTGATGACAATAGAACAAGAACAACTGTTGTTCAATATTTTCGTGAGAAATACAATGTTGAGCTGAAGTATTTGTCTCTTCCTGCCCTCCAAGCTGGGAATGACACAAAACCTATTTATATGCCTATGGAGCTTTGCAAGATAGCTGCTGGGCAAAGGTACTCAAAGAAACTGAATGAGAGGCAGGTAACTGCACTTTTGAGAGCAACCTGTCAACGACCTTATGATAGGGAGAAGGACATTAGAGAGATGGCCAGACGTAACAATTTTAATAGAGACAAGATTGTCCATGAATTTGGAATTAAAGTGAGCGAAGAATTGGCATTGTGTAATGCACGTGTTTTGCCTCCTCCAAGGCTTAAATATCATGAAGCTGGGAAGGAACCAGTTGTTGAACCCATGAGGGGTCAGTGGAATATGATAAACAAGAAAATGATTAATGGCGGAAATGTGCAATACTGGACTTGTCTGAACTTTTCTACACGAGTGAGCAGAGATTTGCCACATCAATTCTGTAATGAGTTGGTAAATATGTGCACCAGTAAGGGAATGGTTTTTAATCGAACACCTTTGCTTCCTATAAGGTCATCTCTTCCTGGTCAAATAGAGGGAGTTCTTAGAGATGTTTACAAGAAATCTGATGGGAAACTTCAGTTGTTGATTATAATCTTACCTGACATCAAAGGTTCTTATGCCAAGATAAAACGCATCTGTGAAACAGAATTGGGAATAGTGTCTCAATGCTCTCAGCCCAAGGAAGCTGCAAGGCTACAGAAGCAATATCTTGAAAATTTGGCTCTCAAGATCAATGTTAAGGTTGGGGGTCGCAATACGGTGTTGATGGATGCAATTCAGAGGAGAATTCCTCATGTGACTGATCGCCCTACTATAATATTTGGTGCGGATGTAACACATCCTCAGCCAGGGGAGGACTCGTGCCCTTCTATAGCCGCGGTTGTAGCATCCATGGATTGGCCTGAGGTCACTAAGTACCGTGGAATTGTTTCTGCCCAAGCGCACCGTGAAGAAATTATACTCGATCTCTATAAAACGTCTCAGGATCCTGAGAAGGGAGTTGTACACGGTGGAATGATTAGAGAGCTACTTGTTGCATTCTATAAATCAACCAAATTTAAGCCCGACAGGATTATATTCTACAGAGATGGAGTTAGTGAAGGCCAATTTAATCAGGTTCTACTTCATGAAATGGAAGCAATAAGAAAGGCTTGTGCCTCCTTACAGGAAGGATATATGCCAAGAGTAACCTTCTTGGTGGTACAGAAAAGACATCACACTCGATTCTTCCCTGTTGATCATAACAGTCGTGATCAAACTGATAGAAGTGGAAATATTTTGCCAGGCACCGTTGTTGATACTCGTATTTGTCATCCCAGAGAATTTGACTTTTATCTCAACAGTCATGCTGGCATTAAGGGAACTAGCCGACCTACACATTATCATGTATTGTTTGATGAAAACAACTTCAAGGCTGATGAGTTGCAGACTTTGACAAATAACTTGTGTTACACGTATGCAAGGTGCACTAGATCGGTGTCCATAGTTCCTCCTGCTTATTATGCCCATTTGGCTGCTTTCCGTGCTCGCTACTACATTGAAGGCGAGACATCGGATTTGGATTCTGGGAGTGGAAGTAGGAGCACTAACGTGTTGGTAACTCTTCCGGAAATCAAGCCCAATGTCAAGGATGTTATGTTTTACTGCTAA 2805 0.4339 MPRRGSRKQPEVRPLQPSPAPSQSAPGQNVARGGSQGGLGRGAPSSSVASAPPTSAITTDAPPSDLLAQMTLQSTAPSSSKAMRFADRPDFGRMGKKIQVRANHFLVDVADRDLHHYDVSISPEITSKQISRNVMNQLVQLYRESHLNKRIPAYDGRKSLFTAGPLPFLSKEFVVKLVDSDEHGSSSASTKKKREREFKITIRYASKADLHHLQQFLRCQQLDNPQETIQALDVVLRASPSAKYTVVGRSFFSPSLGQTGELGDGIEYWRGYYQSLRPTQMGLSLNLDVSARAFYENVFVTEFIAKHYNFNFSRRLSDQDRIKIKKVLRGVKVEFTNGQCTRSYKITGVSKEPLGELTFTLDDNRTRTTVVQYFREKYNVELKYLSLPALQAGNDTKPIYMPMELCKIAAGQRYSKKLNERQVTALLRATCQRPYDREKDIREMARRNNFNRDKIVHEFGIKVSEELALCNARVLPPPRLKYHEAGKEPVVEPMRGQWNMINKKMINGGNVQYWTCLNFSTRVSRDLPHQFCNELVNMCTSKGMVFNRTPLLPIRSSLPGQIEGVLRDVYKKSDGKLQLLIIILPDIKGSYAKIKRICETELGIVSQCSQPKEAARLQKQYLENLALKINVKVGGRNTVLMDAIQRRIPHVTDRPTIIFGADVTHPQPGEDSCPSIAAVVASMDWPEVTKYRGIVSAQAHREEIILDLYKTSQDPEKGVVHGGMIRELLVAFYKSTKFKPDRIIFYRDGVSEGQFNQVLLHEMEAIRKACASLQEGYMPRVTFLVVQKRHHTRFFPVDHNSRDQTDRSGNILPGTVVDTRICHPREFDFYLNSHAGIKGTSRPTHYHVLFDENNFKADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDLDSGSGSRSTNVLVTLPEIKPNVKDVMFYC 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0205 934 CDD PAZ_argonaute_like 300 409 - -
Lele12g0205 934 Pfam Piwi domain 581 898 IPR003165 GO:0003676
Lele12g0205 934 Gene3D - 474 641 - -
Lele12g0205 934 MobiDBLite consensus disorder prediction 1 62 - -
Lele12g0205 934 ProSiteProfiles PAZ domain profile. 298 410 IPR003100 GO:0005515
Lele12g0205 934 SMART PAZ_2_a_3 298 430 IPR003100 GO:0005515
Lele12g0205 934 Gene3D - 647 934 IPR036397 GO:0003676
Lele12g0205 934 Pfam Argonaute linker 2 domain 436 482 IPR032472 -
Lele12g0205 934 ProSiteProfiles Piwi domain profile. 579 899 IPR003165 GO:0003676
Lele12g0205 934 FunFam Argonaute 10 474 641 - -
Lele12g0205 934 Pfam Mid domain of argonaute 493 572 IPR032473 -
Lele12g0205 934 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 78 900 - -
Lele12g0205 934 Gene3D paz domain 292 414 - -
Lele12g0205 934 SMART Piwi_a_2 579 899 IPR003165 GO:0003676
Lele12g0205 934 SMART DUF1785_2 245 297 IPR014811 -
Lele12g0205 934 Pfam PAZ domain 319 426 IPR003100 GO:0005515
Lele12g0205 934 Pfam N-terminal domain of argonaute 96 236 IPR032474 -
Lele12g0205 934 CDD Piwi_ago-like 454 898 IPR045246 -
Lele12g0205 934 Pfam Argonaute linker 1 domain 247 296 IPR014811 -
Lele12g0205 934 SUPERFAMILY Ribonuclease H-like 573 899 IPR012337 -
Lele12g0205 934 SUPERFAMILY PAZ domain 97 451 IPR036085 GO:0005515
Lele12g0205 934 MobiDBLite consensus disorder prediction 40 62 - -
Lele12g0205 934 FunFam protein argonaute 10-like 647 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0205 Lele-ChrLele12 1647687 1653157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0205 47 934 Eukaryotic Initiation Factors Gene Family AT1G48410 59.483 0.0 1106