Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0204 ATGGCTAACCTTGTTATATGCTCGTTCCAACGGTTTTTCTGGTTCTTCCTGATCTTCTTCCTTTGTGTTGATGCTCTCAACATCAAACCAAGGTTAGGAGTTTCAAGGAAAATCCACAAACAACGTCTTCAACCACAAACTTCGTCTTCCCCGAATTCGGTTGAGGAAGAAGTGGAGACATTCTACTACACCCAAAGACTGGATCACTTCAACTACAGGCCTGACAGCTACGCCACTTTTCAACAAAGGTATCTCATAAATTCGAAGTTCTGGGCTGGACCTAACTCAAGCGCACCCATTTTTGCATACCTTGGTGCAGAAGAGCCTGTCGACGAGGGTATAAATGTTGTCGGATTTCTCAGAGAAAACGCCCCTCAATTCAATGCTCTTATTGTTTATATTGAGCATAGATTCTACGGGAAATCCATCCCATTCGGTTCCATGAAGAAAGCAATGAAGAAAGCAAATACTCGAGGCTATTTCAACTCAGCCCAAGCTCTAGCAGATTATGCTGCTGTTCTTTTACACATAAAGGAACGTTTGTCTGCTCACACTTCTCCCATCATCGTTATCGGAGGATCCTATGGTGGAATGCTTGCCTCGTGGTTCAGGCTAAAGTATCCCCACATTGCTCTGGCTGCTTTGGCTTCATCAGCACCCATTCTTTACTTCAATGGCGTCGCCCCACAAGCTGGATATTATTATATTGTCACCAAGGATTTTAAAGAAGCTAGTGAGAGCTGCTACCAAACTATAAGAAAATCATGGTCTGAGATCGACAGGGTGGCTAAGATGCCTAACGGTCTTTCAGTTCTCAGCAACACATTTAAAACTTGCAGCAAACTGAGACACAGTTTTGAGCTGAAGGATTACTTGGATTCAATATATACTGAGGCAGCTCAGTATAATGATCCTCCAGATTACCCAGTTAATGTGATGTGTGAAGCCATTGATGCAGCAGCAAAGAAGACAGATACTCTTGGCCAAATATTTGAAGGTCTTGTGGCTTATAACCGAAACAAGTCCTGCTATGACACCAATCAATTCAATCATCCCACCGAAACTAACATTGGATGGAGATGGCAGAGTTGTAGCGAGATGGTGATGCCGATCGGTCATGATAGGGACGATACAATGTTCCCACCGGAACCTTTCGATATGAAGAGCTTTGTGGATGAATGCAAGAGCTTGTATGGTGTTCGTCCACGACCTCATTGGGTGACAACTTATTATGGGGGTCCTGACTTGAAGCTGATCCTCCATAGATTTGCCAGCAACATTATCTTCTCCAATGGATTGAGAGATCCGTACAGTTCCGGCGGGGTTTTGGATGATATATCAGATAGTATCATTGCTCTATCCACGGTCAACGGATCTCATTGCCTGGACATACTCGAAGCTAAACCAAGCGATCCTGAATGGTTGGTGAAGCAGAGGAAGACAGAGATCAGAACAATTAGAGGCTGGATCGCCGAGTACCAAGCAGATACACTTGCATTACTAGATAAGCAAGTTCATCATTAG 1524 0.4396 MANLVICSFQRFFWFFLIFFLCVDALNIKPRLGVSRKIHKQRLQPQTSSSPNSVEEEVETFYYTQRLDHFNYRPDSYATFQQRYLINSKFWAGPNSSAPIFAYLGAEEPVDEGINVVGFLRENAPQFNALIVYIEHRFYGKSIPFGSMKKAMKKANTRGYFNSAQALADYAAVLLHIKERLSAHTSPIIVIGGSYGGMLASWFRLKYPHIALAALASSAPILYFNGVAPQAGYYYIVTKDFKEASESCYQTIRKSWSEIDRVAKMPNGLSVLSNTFKTCSKLRHSFELKDYLDSIYTEAAQYNDPPDYPVNVMCEAIDAAAKKTDTLGQIFEGLVAYNRNKSCYDTNQFNHPTETNIGWRWQSCSEMVMPIGHDRDDTMFPPEPFDMKSFVDECKSLYGVRPRPHWVTTYYGGPDLKLILHRFASNIIFSNGLRDPYSSGGVLDDISDSIIALSTVNGSHCLDILEAKPSDPEWLVKQRKTEIRTIRGWIAEYQADTLALLDKQVHH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0204 507 Gene3D alpha/beta hydrolase 62 490 IPR029058 -
Lele12g0204 507 SUPERFAMILY alpha/beta-Hydrolases 117 413 IPR029058 -
Lele12g0204 507 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 22 496 - -
Lele12g0204 507 Gene3D Serine carboxypeptidase S28, SKS domain 229 384 IPR042269 -
Lele12g0204 507 FunFam Serine carboxypeptidase S28 family protein 229 357 - -
Lele12g0204 507 Pfam Serine carboxypeptidase S28 65 480 IPR008758 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0204 Lele-ChrLele12 1639357 1642151 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0204 12 1639357 1642151 Lele29g0309 29 1839867 1845836 CCT
Lele12g0204 12 1639357 1642151 Lele30g1105 30 14134544 14138537 CCT
Lele12g0204 12 1639357 1642151 Lele31g1239 31 18681471 18684640 CCT
Lele12g0204 12 1639357 1642151 Lele32g0288 32 1803167 1806308 CCT
Lele09g1119 09 20346616 20349021 Lele12g0204 12 1639357 1642151 hybridization
Lele10g1085 10 22228989 22231713 Lele12g0204 12 1639357 1642151 hybridization