Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0203 ATGGAACACTCCTTGTCAATTCAATGCCTTCTTCTCATCCCTTTCATATTTTCATCCTATTTGACGGCAACACAATCTTCAATAATTCCAAGGCTCTCCCCTGTTGGGGACATACCCTTACACGATTCTGCAACCCTGATGACGGCAGAAGATACAGATACAGAGGAATTGAAAACTTTATATTTCAAACAGACACTTGATCACTTCAACTATAGGCCAGATAGCTACACAACATTTCCACAAAGATATCTGATCAATTTCAAGTATTGGGGTGGAGCCAATTCCAGTGCTCCCATATTTGCTTACCTTGGTGCAGAAGAACCCATAGATAATGACCTTAAGGTCATTGGATTTCTTAATGACAACGCCCCTTCCTTTAAGGCTCTCATAGTTTATATAGAACACCGGTACTATGGGAAATCGGTGCCATTTGGATCCTTTGAAGCAGGATTGAAGAATGCAACAACTAGAGGGTATTTCAACTCTGCTCAAGCTATTGCAGATTATGCAGCAGTACTCATACATATAAAGAAGAAACTGAAGGCACAGAAGTCCCCAGTGATTGTTATTGGAGGATCATATGGTGGAATGCTTGCTTCATGGTTTAGACTCAAATATCCGCATGTTGCTCTTGGTGCACTCGCTTCATCAGCTCCAATTCTCTATTTTAATAATATCACACCATCAAATGGTTACCATTCTGTTGTCACAAGAGATTTTCGAGAAGCAAGCGAAACATGCTATGAAACTATACTCAAGTCCTGGTCTGAAATCGACAGAGTAGCTTCTGAGGCAGACGGCCTTTCCATCCTTAGTCAGAGATTCAACACTTGCCATCCTCTGAACTCATCTTCTGAGTTGAAAGACTACCTAGAGACGATGTATGATACAGCAGCTCAATATAATCAACCACCAAGGTATCCGGTTACCGTGGTCTGTGGCGGCATCGATGGGGACACTTTTGGAACTGATATTCTCAGTAAGATATTTGCAGGTGTAGTAGAGTATAGAGGCAATGCTACATGTAAAGTCAATGGCCCGATTAATGTAACTGAGACTGCTGTTGGTTGGAGATGGCAGACTTGTAGTGAGATGGTGATTCCTATAGGGCGTGACAATGATACAATGTTTCAACCAAGCACTTTCAATCTCAAGAGCTATGTGAGGGATTGCAAGAAGGCATATGGTGTCGCACCTCGGCCACATTGGGTCACTACTTACTATGGAGGCCATGATATCAAGTTGGTCCTTCAAAGGTTTGGGAGCAACATCATTTTCTCAAATGGGCTAAGAGATCCATATAGTAGCGGAGGGGTTCTGGACAGCATATCGGACAGTATCGTTGCCGTCCATACAGTAAACGGATCTCATTGCTTGGATATCCTGAACGCAATGCCAAGTGATCCAGAATGGCTAGTGAAACAACGAAAGGAAGAGGTGGAGATTATTACTAGGTGGATCACACAGTACTATGCGGATCTTCGCGCCCTCAAAGTCTACTAA 1503 0.4285 MEHSLSIQCLLLIPFIFSSYLTATQSSIIPRLSPVGDIPLHDSATLMTAEDTDTEELKTLYFKQTLDHFNYRPDSYTTFPQRYLINFKYWGGANSSAPIFAYLGAEEPIDNDLKVIGFLNDNAPSFKALIVYIEHRYYGKSVPFGSFEAGLKNATTRGYFNSAQAIADYAAVLIHIKKKLKAQKSPVIVIGGSYGGMLASWFRLKYPHVALGALASSAPILYFNNITPSNGYHSVVTRDFREASETCYETILKSWSEIDRVASEADGLSILSQRFNTCHPLNSSSELKDYLETMYDTAAQYNQPPRYPVTVVCGGIDGDTFGTDILSKIFAGVVEYRGNATCKVNGPINVTETAVGWRWQTCSEMVIPIGRDNDTMFQPSTFNLKSYVRDCKKAYGVAPRPHWVTTYYGGHDIKLVLQRFGSNIIFSNGLRDPYSSGGVLDSISDSIVAVHTVNGSHCLDILNAMPSDPEWLVKQRKEEVEIITRWITQYYADLRALKVY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0203 500 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 48 493 - -
Lele12g0203 500 SUPERFAMILY alpha/beta-Hydrolases 125 416 IPR029058 -
Lele12g0203 500 Gene3D alpha/beta hydrolase 61 487 IPR029058 -
Lele12g0203 500 Gene3D Serine carboxypeptidase S28, SKS domain 228 381 IPR042269 -
Lele12g0203 500 FunFam Serine carboxypeptidase S28 family protein 228 356 - -
Lele12g0203 500 Pfam Serine carboxypeptidase S28 64 477 IPR008758 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0203 Lele-ChrLele12 1613262 1616271 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0203 12 1613262 1616271 Lele29g0307 29 1817917 1823180 CCT
Lele12g0203 12 1613262 1616271 Lele30g1108 30 14152426 14157771 CCT
Lele12g0203 12 1613262 1616271 Lele31g1242 31 18704363 18709593 CCT
Lele12g0203 12 1613262 1616271 Lele32g0286 32 1783007 1788353 CCT
Lele10g1088 10 22279144 22281926 Lele12g0203 12 1613262 1616271 hybridization