Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0172 ATGGCTGAGATTGAGGGATTTCCAGGAAGCTCCATGCATGGAGTCACTGGCAGAGAGCAAACCTTCGTATCCTCTGTTGCTTCTCCGATGGTCCCTTCCGATCACACTGCCAAATTCGCTCTCCCCGTTGATTCCGAGCATAAAGCTAAAGTCTTTAAACTCTTCTCTTTTGCCAATCCCCACATGAGAACCTTTCACTTGTCCTGGATTTCCTTCTTCACTTGCTTCGTTTCAACCTTCGCGGCAGCCCCCCTGGTTCCCATAATCCGCGACAACCTTAACCTCACCAAATACGACGTTGGGAATGCGGGTGTCGCCTCTGTCTCCGGCAGCATCTTCTCCAGGCTTACCATGGGTGCAGTTTGTGACCTCTTAGGTCCACGTTATGGCTGTGCCTTTCTCATAATGCTCACCGCACCAACGGTGTTCTGCATGTCGTTTGTGAAAGATGCTGCTGGTTACATAGCGATACGGTTCATGATAGGGTTTTCGTTGGCAACGTTTGTGTCGTGTCAGTACTGGATGAGTACTATGTTTAACAGTAAGATCGTAGGGCTCGCGAACGGGACGGCAGCTGGGTGGGGTAACATGGGAGGTGGGGCCACTCAGCTTATAATGCCATTGGTTTATGAATTGATCAAAAGAACTGGATCTACCCCTTTTGTTGCCTGGAGAATTGCATTCTTCATCCCTGGTTGGATGCATATCATCATGGGAATCCTCGTCTTGACCCTCGGCCAAGACCTGCCTGATGGCAACCTCGGTGCTTTGCAGAAGAAGGGTAATGTCGCCAAGGACAAGTTCTCCAAGGTGTTGTGGTATGGGATAACGAATTACAGGACATGGATTTTTGCTCTATTGTACGGGTACTCTATGGGAGTTGAATTGACCACTGATAATGTGATTGCTGAATATTTCTATGATAGGTTCAATCTGAAGCTACACACCGCAGGAATCATTGCTGCTTCATTCGGAATGGCTAACTTCATCGCTCGTCCTTTCGGCGGCTACACTTCCGATTATGCTGCTCGTATATTTGGCATGAGAGGAAGGCTTTGGACGCTCTGGACACTTCAAACCTTAGGAGGCGTTTTCTGTATATGGCTTGGACGTGCCAATTCTCTTCCCATCGCTATCGTTGCCATGATTTTATTCTCCATCGGAGCTCAAGCAGCCTGCGGTGCAACTTTCGGCATCATCCCCTTCATCTCAAGGCGCTCTCTGGGCATCATCTCGGGTTTAACCGGGGCAGGTGGGAACTTCGGGTCGGGGCTAACCCAGTTGATATTCTTCTCAACCTCAAGTTTCTCCACCTCGGCAGGTCTGTCGTGGATGGGTGTTATGATAGTGGCCTGCACACTTCCGGTGACTCTGGTTCACTTCCCTCAGTGGGGCAGCATGTTCCTTGCTCCAACTAAAGACGTTGACAAGTCTCAAGAAGAGTACTATTACGCATCTGAATGGAACGAAGAGGAGAGAGAGAAGGGTTTGCACCAACAAAGTCTAAAGTTCGCCGAGAACAGCCGTTCTGAGAGAGGCAAGCGTGTCGCCTCCGCCCCGACTCCACCTAACACAAGTCCGACTCAACAAGTTTAA 1596 0.4969 MAEIEGFPGSSMHGVTGREQTFVSSVASPMVPSDHTAKFALPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKYDVGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVKDAAGYIAIRFMIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYELIKRTGSTPFVAWRIAFFIPGWMHIIMGILVLTLGQDLPDGNLGALQKKGNVAKDKFSKVLWYGITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANFIARPFGGYTSDYAARIFGMRGRLWTLWTLQTLGGVFCIWLGRANSLPIAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSSFSTSAGLSWMGVMIVACTLPVTLVHFPQWGSMFLAPTKDVDKSQEEYYYASEWNEEEREKGLHQQSLKFAENSRSERGKRVASAPTPPNTSPTQQV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0172 531 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Lele12g0172 531 MobiDBLite consensus disorder prediction 489 513 - -
Lele12g0172 531 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
Lele12g0172 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 516 IPR044772 GO:0015112
Lele12g0172 531 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Lele12g0172 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Lele12g0172 531 SUPERFAMILY MFS general substrate transporter 58 459 IPR036259 -
Lele12g0172 531 MobiDBLite consensus disorder prediction 489 531 - -
Lele12g0172 531 FunFam High affinity nitrate transporter 57 254 - -
Lele12g0172 531 FunFam Nitrate transporter 2.1 265 466 - -
Lele12g0172 531 Gene3D MFS general substrate transporter like domains 264 467 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0172 Lele-ChrLele12 1332223 1334017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0172 1 523 Inorganic Solute Cotransporters AT5G60770 81.453 0.0 895