Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0163 ATGTCTCTCTTGTTTTTGTCCTGCTACTGGCGAGAGCAATCAAGATTGAGGTTGTTTAGGATTTTCTGTCTCGCATCTGTTTTGTGTGGGGTTGGAATGAGCAGTTTAAGGCCAGAATCGCATGTAGCACAACAGATTCGGCGTGATAAGTTGAGAATCCAGAATAGTTCCCAGCATTTACAAGATTTCCCGACTAATATTGAACAATTGTCACTACACCCAAGCTTCAACTCTGATTTTCTGCAAGTTAGGAATGTCAGGAATGTAAACATGCTTTATGAACAAGCTTTTTGTCAATCGGAAATTGCCAGTTTTTCACCACCTTCGAATACTTTATCTACTGGTGGCGATGTTAAACCTAGTAGACTGATGTTACCTCACTATGCTTCATTTCCCTATTCATCTGTATCGGAACCAGCACCGTCGTCCTCCGCCGATCAACCCCGAGATAACTCAGGTTATGATTGGATGATTAGCTATGGAAGTAGTTCCGGGGTTCATGAAACTAATAATCCCAACTCTAATTTTGCGACTGAGCTTAATAGTAACAACGTGGCTGTGTATCAACAATTGGCGAAGCCTAGTTACAACGAACTCATCGGAAGGCAGTTAGGGGAAATGCATCGTCCTTCTTCTCCACCACCTCCACTTTTCCAGAACTCTTTGCACGATATCGTCAAGTCTGCTTCTGTAAGTGCCCAAGGATCTGATAATCATATAGTCTCGCAGATGCAACATCATTCTGGTCATGGGATCTGGATGGGAAATCAAAATCAATCATCAAATCAGTTTCATTTCGGAAATACTAATAATTTTAGCGATCCCATAAATCCTCAGGGATTATCTTTATCACTTTCGTCAAATTGCCATTCCAAGGCTTCTCTTTCTGGGTTCCCATGTAGTGAGGGATGTGGTGGATCAGACGAACTTCACTCGTCACGTTGTGATAAATCCGCGAAATCTATCATGAAATCCTCCTCCTTAGTTCCTAAAGATTGTGGAAAATCACTCCAGGAAGTCGTTGGCGTAGCTTCGAGCACTAATGCTTATCGAGGTAATGTAGGTCCGCTTGGGCCTTTCACTGGATATGCAACCATTTTAAAGAGTTCGAGATTCTTGAAACCAGCTCAAGAGTTGTTGGATGAATTCTGTAGTGTGTGTGGATCTAACATTATGATCAAAGCACCAGTTGGTTCAGATTTCTCGACGGTGTCTGGAGAAGGAAGTGCTACTACTTCTGCAGCTGAAGCTGTCATTAATGCGACTGAAAGTGGAGTTGGTGCAAAAGTGAGTGTTGGTAATCCGGGTGAGGCTTCGTGTTCTATTTTGTATAATTCCAAGGAAAATAGTGGTGATTGTGAATCAAGGGGAAACTTTGATTGTTCTTCTCGGTCGGTGTATCAGCAAAAAAAGGCGAAGCTACTGTACATGCAAGAGGAGGTTACGAGAAAATACAGGCAATATCACCAACAAATGCAAATGGTGGTTACATCTTTTGAGTCAGTAGCAGGTCTTAGTTCGGCTACGCCTTATATAACTATGGCTCTCAAGTCAGTAGCAAGACACTTCAAGGGCCTGAAAAATGCTATCTTGGATCAGATGAAGCATTTAAGAGAGTTGTTGGGGGAGGATTTTTCAGGATCCACGTCTGGTACAATGATGAGTAAACTGGACACAGGCCTAACATATCTGGACCAGAGCTTTCATCAGAAGAACAAAACTGCATTTCTTGAACCTCAACAAGTATGGAGGCCACAAAGAGGTTTGCCAGAACGCGCGGTCGCAATTCTTAAAGCTTGGTTGTTTGAGCATTTCCTTCACCCGTACCCCACGGATACTGATAAACACATGCTGGCTACACAAACGGGTCTATCTCGCAACCAGGTGTCGAACTGGTTCATAAATGCTCGAGTCCGTGTGTGGAAGCCAATGGTTGAAGAAATACACAATCTTGAAACAAAAGGCATGGCGGGTAGTGGCGGCGGCGGCTGCCAACTGCAGAACGAGGGAACATCTGGTGCGGAAGGAAGCAATCAACAACAAGAAGCAATGGTTGAAGAACCTGAACCTCCTTTTAAGCAATTCCCGTGTTTGGGAATGAGTTCCTTGGGTGGAGGGAATTCGGAGGGGGTGGGATTTATGAGTTCATCAGAGCAATGGAATCAAGAGAAGAGGTCTAAAATGGAATGTCAGATGACGAGGGCGGCGGAGGACATGGATGGGACATTAATGGGTTTCTTACCCTACAGGCGTGGTGGTGGAGGCCTCGATGTGGGGGAACTAGGGTCTGTGTCATTAACATTGGGTCTTAGACATGGGGTTGAAGGCGCACAACACCACCACCAGCAACAACAACAATTACAACACCACCAGGAGGATCGGATTAGACGTCACTTTGGAGAGCATATGATCCACGACTTTGTGGGTTAA 2430 0.4444 MSLLFLSCYWREQSRLRLFRIFCLASVLCGVGMSSLRPESHVAQQIRRDKLRIQNSSQHLQDFPTNIEQLSLHPSFNSDFLQVRNVRNVNMLYEQAFCQSEIASFSPPSNTLSTGGDVKPSRLMLPHYASFPYSSVSEPAPSSSADQPRDNSGYDWMISYGSSSGVHETNNPNSNFATELNSNNVAVYQQLAKPSYNELIGRQLGEMHRPSSPPPPLFQNSLHDIVKSASVSAQGSDNHIVSQMQHHSGHGIWMGNQNQSSNQFHFGNTNNFSDPINPQGLSLSLSSNCHSKASLSGFPCSEGCGGSDELHSSRCDKSAKSIMKSSSLVPKDCGKSLQEVVGVASSTNAYRGNVGPLGPFTGYATILKSSRFLKPAQELLDEFCSVCGSNIMIKAPVGSDFSTVSGEGSATTSAAEAVINATESGVGAKVSVGNPGEASCSILYNSKENSGDCESRGNFDCSSRSVYQQKKAKLLYMQEEVTRKYRQYHQQMQMVVTSFESVAGLSSATPYITMALKSVARHFKGLKNAILDQMKHLRELLGEDFSGSTSGTMMSKLDTGLTYLDQSFHQKNKTAFLEPQQVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHNLETKGMAGSGGGGCQLQNEGTSGAEGSNQQQEAMVEEPEPPFKQFPCLGMSSLGGGNSEGVGFMSSSEQWNQEKRSKMECQMTRAAEDMDGTLMGFLPYRRGGGGLDVGELGSVSLTLGLRHGVEGAQHHHQQQQQLQHHQEDRIRRHFGEHMIHDFVG 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0163 809 SMART HOX_1 583 647 IPR001356 GO:0003677
Lele12g0163 809 FunFam BEL1-like homeodomain protein 9 586 648 - -
Lele12g0163 809 Gene3D - 586 648 - -
Lele12g0163 809 Pfam Homeobox KN domain 600 639 IPR008422 GO:0003677|GO:0006355
Lele12g0163 809 SMART prehox3 361 532 IPR006563 -
Lele12g0163 809 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 243 675 - -
Lele12g0163 809 MobiDBLite consensus disorder prediction 664 684 - -
Lele12g0163 809 MobiDBLite consensus disorder prediction 135 156 - -
Lele12g0163 809 SUPERFAMILY Homeodomain-like 585 650 IPR009057 -
Lele12g0163 809 Pfam Associated with HOX 366 530 IPR006563 -
Lele12g0163 809 ProSiteProfiles 'Homeobox' domain profile. 580 643 IPR001356 GO:0003677
Lele12g0163 809 CDD homeodomain 583 644 IPR001356 GO:0003677
Lele12g0163 809 MobiDBLite consensus disorder prediction 655 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0163 Lele-ChrLele12 1256630 1262300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0163 367 652 Homeobox Transcription Factor Family AT4G34610 44.056 2.14e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele12g0163 POX 5.6e-39 No_clan