Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0158 ATGCTATTTCGTGTTCCTCAAGTAGCATTCTTGTTCCTCTTTAATCCAGCATTTCCTTTAATGGTTTACGCTTGCAGACTAGGGGCTACATCGTGTTACACTGTACAACTGATTTGTGTATTGCGTATGATTTTGGAAGTTCTCTACACTGAAAGGATATCTGCTATAACAACATCGTCGGTGGTCAATTCATTTTACCAGAAACAACTGCAATTCAAAGTTGCTCTTGCTTTTGTTATTAGCTTGCTCTGGATTCAGCCCTCATTTTGTGATGGACCTTCTGGGAGCCTCAACAAATGGATATGTACATGTTCTTTTCAAGGGAACCAGAGTTCCTCTCTTGCTAACTGTTCTACATCATGCGATTGCCGATTAGATGCCAAAGGGAGTGCATCCTTATGGACATGCTTGTGTGATCCCAATGGGTTTCTTAATGTGGAAGCAGATGGCCATAGTTCGAATTGCTTTACTGCCTGCAACTGCACCTGGGGAGCTCTCACCATCTCACAAGGTTCAAAGAAACACATTTCCAGCAAGATTGTTATAATTATACTACTAGTATGTGTTATATGCACAACTGGTGCATTTCTTGCCTCAATCATATGCTATGTATGGCGAAGGGACAAATGTACTATTCAATCACCCATATTCTCATCAGACAACGAAACAAGTTACAATAGCACTGCCATCTTAATTAGTAATAGAACTTCAGTGCCAGAAACAAAACCTGTTACAAATTCTCCCATTAATCTGATCTCAGGATGTTTTCAGACGGCCTCTTTCTTGTGTGGGAGCAAGGGAGAAACTTTTCATGGAAATATTATTCGATTTTCATTTGCAGTACTAGAAAATGCCACTGAAAATTTTTCAGCTTCCAACCTGATTGGACTTGGCCGAAGTAGTTACGTATATCGTGGTCGACTGAAGAGTGGTACTAATGTGGCAGTGAAGAAACTAAAAGCTCAAGGGGGCACTGAAGCAGACTCTGAGTTTTTGACAGAGATTGAACTACTATCTCGACTTCATCATTGTCACCTGGTGCCTTTGCTTGGATACTGCATAGAATCAAAAGGAAGACATGTTGAGAGGTTACTTGTATTTAAGTACATGGCTAATGGTAATTTGAGGGACTGTTTGGATGGAGTTTCTGGAAAAAGTCTGGATTGGGCTACGCGTGTTACAGTTGCCATAGGAGCTGCAAGGGGATTGGAATACCTACATGAAGCGGCTGCTCCAAGAATTCTGCATAGAGATGTTAAATCAACAAACATTCTTCTGGATGAAAATTATCACGCAAAAATTACCGATCTTGGTATGGCAAAAAACTTACGAGCCGATGACTTCCCCAGCAGTTCAAATTCTCCAGCTAGAATGCAGGGCACATTTGGTTATTTTGCACCTGAGTATGCAATTGTTGGAAGGGCCTCTCTTAAGTCAGACATCTTCAGTTTTGGGGACAAGAAACATTCCAGTGAACCTTTTCCAGGAACCAAAAATTCAGAGAAGCTAAAACAAGTTCCATCTAGTAGAGTAGATATTAATCACAATCCTTGGGTTGGAAACTTCAATAATGAAGCAGATATAGTTTCTGCTGAGCATATGGATAGTTTGGTCCTCGTGACTTCAAAAGCTGAGAGCCGGTATGGATCAGAGGAAGAAATTGTGGACCTAACTGAGCCTCGGTTCGAATCATTTTCCGTGACAAACATACAATTATACTATCCTTTATTGTGCGCCGCTGAATGGGATATGAAGAAGGAAGCAATCTCATATGCTGGCTATGAGAATATATTCCACGATTCTCTTGTTGTCGTCCTCCGCTCTTTGAAGCAGGGCCGCCTCCGCCCTAGAGCGAGCTTTGCGTCTTTATTTCCAGATTTTTCATATTGCCAGGGAAATCAACAAGTGGATATATCTCTTCCTGGTGTAACATTTGGGCCAAGAGAGAGTAAGAAGGCAACGAAGTATAGCAATATAGGGCGTCTAAATTGCAAGGTCAGCTATACAACTTTTGCAACTCTAGATCATGAACAGGGATCAAACCACCAAGAATATTCCAGGATGCTTTATAAAGCTCTGGAGGGTGCAATAATTTTGAAAACTTTCCCCAAGACGACCGCGGATGTTTTTGCACTGGTGCTGGAATCTGGTAGCAATGATTTTGCTTCTCAGCAAGACTTGTTTAGTTATAAAAAATGTTTATCCGTTCGATGGTTCCAGTCACGTCTTGATAGGAACCTTGTCATTAATCTAAAGTTGGAGGAGAACTGTCAGGATGGGAGTTTAATGATAAGTTGCATGCCTTCTCGATGCGAAGTCACTCAACTCACTATTACTGGGGATTGGTCCACCCCAATGCTTGATGAGGGAATGCAACTGTGCCTGGATGCATGTGCTGAACTTGCGAAGATTATGAGGTCATGTTTGCGAGATGCTGCTTCAGCTTCACAGGAATAG 2457 0.4168 MLFRVPQVAFLFLFNPAFPLMVYACRLGATSCYTVQLICVLRMILEVLYTERISAITTSSVVNSFYQKQLQFKVALAFVISLLWIQPSFCDGPSGSLNKWICTCSFQGNQSSSLANCSTSCDCRLDAKGSASLWTCLCDPNGFLNVEADGHSSNCFTACNCTWGALTISQGSKKHISSKIVIIILLVCVICTTGAFLASIICYVWRRDKCTIQSPIFSSDNETSYNSTAILISNRTSVPETKPVTNSPINLISGCFQTASFLCGSKGETFHGNIIRFSFAVLENATENFSASNLIGLGRSSYVYRGRLKSGTNVAVKKLKAQGGTEADSEFLTEIELLSRLHHCHLVPLLGYCIESKGRHVERLLVFKYMANGNLRDCLDGVSGKSLDWATRVTVAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENYHAKITDLGMAKNLRADDFPSSSNSPARMQGTFGYFAPEYAIVGRASLKSDIFSFGDKKHSSEPFPGTKNSEKLKQVPSSRVDINHNPWVGNFNNEADIVSAEHMDSLVLVTSKAESRYGSEEEIVDLTEPRFESFSVTNIQLYYPLLCAAEWDMKKEAISYAGYENIFHDSLVVVLRSLKQGRLRPRASFASLFPDFSYCQGNQQVDISLPGVTFGPRESKKATKYSNIGRLNCKVSYTTFATLDHEQGSNHQEYSRMLYKALEGAIILKTFPKTTADVFALVLESGSNDFASQQDLFSYKKCLSVRWFQSRLDRNLVINLKLEENCQDGSLMISCMPSRCEVTQLTITGDWSTPMLDEGMQLCLDACAELAKIMRSCLRDAASASQE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0158 818 Gene3D - 629 736 IPR027408 -
Lele12g0158 818 FunFam receptor-like serine/threonine-protein kinase NCRK 263 369 - -
Lele12g0158 818 PANTHER OS01G0750732 PROTEIN 102 485 - -
Lele12g0158 818 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lele12g0158 818 SUPERFAMILY Protein kinase-like (PK-like) 270 485 IPR011009 -
Lele12g0158 818 SMART serkin_6 289 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0158 818 FunFam Os07g0541700 protein 370 461 - -
Lele12g0158 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Lele12g0158 818 Pfam Protein tyrosine and serine/threonine kinase 292 485 IPR001245 GO:0004672|GO:0006468
Lele12g0158 818 Gene3D Phosphorylase Kinase; domain 1 264 369 - -
Lele12g0158 818 Gene3D Transferase(Phosphotransferase) domain 1 370 486 - -
Lele12g0158 818 Gene3D - 737 817 IPR027408 -
Lele12g0158 818 SUPERFAMILY Ribonuclease PH domain 2-like 748 813 IPR036345 -
Lele12g0158 818 Pfam 3' exoribonuclease family, domain 1 646 719 IPR001247 -
Lele12g0158 818 ProSiteProfiles Protein kinase domain profile. 289 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0158 818 ProSitePatterns Protein kinases ATP-binding region signature. 295 318 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0158 Lele-ChrLele12 1206620 1215188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0158 69 571 Receptor kinase-like Gene Family AT2G28250 45.391 5.99e-144 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lele12g0158 PK_Tyr_Ser-Thr 9.3e-35 CL0016