Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0151 ATGGTTCAAATGCCTCCGGTAAACTCCAAAGTCTTTTACTTTCCTCAAGGCCACGCTGAGCACGCTCAGGCCAACCTTAATTTTCCTCCTTCCTTAAGGATTCCACCGCTTATTCTTTGTCGCGTGGTATCGGTGAAATTCTTGGCTGACCCAGAAACTGATGAGGTTTTTGCTAAGATAAGGTTGGTTCCTGTGAGAAATTCCGAGCTCGATTGCGACGCCGACGACGACGGGGTTACGGACGGCAATGGATCGGAGAATTCAGAAAAACCAGCATCTTTTGCCAAGACATTAACCCAATCTGATGCGAACAATGGTGGGGGCTTCTCTGTTCCAAGGTACTGCGCAGAAACTATCTTCCCACGGCTGGATTACACCGCCGAACCACCCGTTCAAACCGTGGCTGCCAAGGACGTTCATGGCGAAAGTTGGAAATTCAGACATATATACAGGGGAACACCTCGTCGGCACTTACTAACCACTGGGTGGAGCACTTTCGTGAACCAAAAGAAACTCGTTGCTGGGGATTCTATTGTTTTTCTGAGGGCCGAAAACGGCGAACTCTGTGTTGGAATTCGCCGAGCAAAACTTGGCGGTTTCGGCAGCCGGATGCAAACCCCATCATCTGGCTGGCGCGGTGGTGCCGCCGGAAGTGGTCTGGGGGCTTGTGGGGGCTTCTCTTATTTCTTGAGAGAGGAGAACAAATTACTGACTAATGCTTGTGGGAATTCAAGCCCTGGAAGAGCAAAAGTGAGGCCTGAATCTGTGATGGAAGCTATGACACTGGCTGCTAGTGGTCAAACATTTGAAGTAGTTTATTATCCTCGAACTAGTACTCCAGAGTTTTCTATTAAGGCTTCTTCTGTGAGGGCTGCAATGAGAACTCAATGGTGCTCTGGCATGAGGTTCAAGATGTCCTTTGAGACCGAGGATTCTTCTAGAATCAGCTGGTTCATGGGGACCATTGCTTCTGTTCAGGTTGTCGATCCCGTGCGTTGGCCCAACTCGCCCTGGCGACTTCTTCAGGTTACTTGGGATGAACCAGATCTGCTGCAGAATGTGAAGCGTGTTAGCCCATGGTTGGTAGAATTGGTATCAAACATGCCGGGCATTCATTTCCCGCCTTTTTCTACACCAAGGAAGAAGCTGCGGCTTCCACATCACTCGGACTTCCCCCTTTATGGTGAATTTCCGATACCGACGTTTTCAGGCAACCCCCTCGGGCTGAGCAGCCCTTTGTGTTGTCTATCTGATAATGCTCCTACAAGCATACAGGGAGCCAGGCAAGCTCAATTTGGAATATCTCTTTCAGATCTCCACCTTAACAATAAACTACAGTTGGGGTTGCTTCCAACTAACATCCAGCAGCTTGATATACATCTCGGGATGTCCAATGGCAAGATGGCAAACGACGGCGAGAACAACGAAAGCTTGTCTTGCTTGCTGACCATGGGAAATTCTTGTAAGAGTCTGGAGAAATCTGATAATGTGAAGAGACACCGGTTCGTGCTTTTTGGTCAACCAATACACACCGAGCAACAAATTTCTCGAAGCTGTTCTCGCAATAAGTTGTCTCAGAATGTTACCGAAAAAGATTTGCCAGATGAAAATAGAGACAAGACAAAGTTCAAATTGGGTGATTCACAATCTGGTCTTTCTCAGCAGTTCTCACCTGGGAAATCTTCTAATAATGTTGAGTATTCTTGGCAATTAGGCTTGGATAACGGTCATTGCAAGGTTTTCATGGAATCCGAGGATGTGGGACGAACCCTTGACCTATCATGTTTCGGTTCTTATGAAGAGCTCTACAGAAGACTGGCCAACATGTTTGGAATCGAAAGATCTACAATGTTACGCCATGTACTCTACTATGATGCATCAGGGGCTGTCAAGCAAACCGGTCTAGAACCCTTCAGTGACTTCATGAAAACAGCAAAAAGATTAACAATTCTGACCGATTCAGGCAGCAAAGGGTTTTAA 1980 0.4717 MVQMPPVNSKVFYFPQGHAEHAQANLNFPPSLRIPPLILCRVVSVKFLADPETDEVFAKIRLVPVRNSELDCDADDDGVTDGNGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVAAKDVHGESWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGELCVGIRRAKLGGFGSRMQTPSSGWRGGAAGSGLGACGGFSYFLREENKLLTNACGNSSPGRAKVRPESVMEAMTLAASGQTFEVVYYPRTSTPEFSIKASSVRAAMRTQWCSGMRFKMSFETEDSSRISWFMGTIASVQVVDPVRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPGIHFPPFSTPRKKLRLPHHSDFPLYGEFPIPTFSGNPLGLSSPLCCLSDNAPTSIQGARQAQFGISLSDLHLNNKLQLGLLPTNIQQLDIHLGMSNGKMANDGENNESLSCLLTMGNSCKSLEKSDNVKRHRFVLFGQPIHTEQQISRSCSRNKLSQNVTEKDLPDENRDKTKFKLGDSQSGLSQQFSPGKSSNNVEYSWQLGLDNGHCKVFMESEDVGRTLDLSCFGSYEELYRRLANMFGIERSTMLRHVLYYDASGAVKQTGLEPFSDFMKTAKRLTILTDSGSKGF 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0151 659 MobiDBLite consensus disorder prediction 528 545 - -
Lele12g0151 659 MobiDBLite consensus disorder prediction 546 562 - -
Lele12g0151 659 FunFam Auxin response factor 92 196 - -
Lele12g0151 659 CDD B3_DNA 93 194 IPR003340 GO:0003677
Lele12g0151 659 Pfam B3 DNA binding domain 94 195 IPR003340 GO:0003677
Lele12g0151 659 SMART B3_2 94 196 IPR003340 GO:0003677
Lele12g0151 659 Pfam Auxin response factor 259 342 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele12g0151 659 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 653 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele12g0151 659 FunFam Auxin response factor 297 370 - -
Lele12g0151 659 ProSiteProfiles PB1 domain profile. 575 655 IPR000270 GO:0005515
Lele12g0151 659 SUPERFAMILY DNA-binding pseudobarrel domain 88 195 IPR015300 -
Lele12g0151 659 Gene3D - 574 658 - -
Lele12g0151 659 ProSiteProfiles B3 DNA-binding domain profile. 94 196 IPR003340 GO:0003677
Lele12g0151 659 MobiDBLite consensus disorder prediction 71 92 - -
Lele12g0151 659 MobiDBLite consensus disorder prediction 516 562 - -
Lele12g0151 659 Gene3D - 297 369 - -
Lele12g0151 659 Gene3D - 92 196 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0151 Lele-ChrLele12 1156337 1158908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0151 1 657 B3 DNA Binding Superfamily AT4G30080 57.228 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele12g0151 B3 3.2e-22 CL0405