Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0150 ATGTTTTGGAAGCTCGCTTCTTTATCTGCCCCCTCGCCTGTGGAGGCAATATTAGACCAGGAGAATTTCACTTTGGAAGAGCTTCTGGATGAAGAGGAAATAATTCAAGAATGCAAGGCCTTAAACAGTCGCCTCATTAACTTTCTGAGGGACAGAGCTCAGGTTGAGCAATTGCTACACTACATTGTGGAAGAACCACCAGAAGATGCTGAAAGCAAGCGGACCTTCAAGTTTCCTTTCATTGCCTGTGAGATTTTTACATGTGAAATTGATGATATTTTAAAGACTTTGGTGGAGGATGAAGAGTTAATGAACTTACTATTCTCCTTCCTGGAGCCTAACCGTCCTCATAGCACCTTGCTGGCTGGGTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTAGGAAGACTCTGCCTCTTATGAATTATGTTCGAGCCCATCAGAATGTTTTTCAGCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTAGTACGATTAGTAGGTGCTGATGACCATGTGTATCCCAACTTTATAGATGTGATACAATGGTTGGTTGAGAGCAACCTGCTAGAGATGATCGTTGATAAATTAAGCCCATCTAGTCCTCCTGAAGTTCATGCTAACGCAGCTGAAACATTGTGTACAATAACTCGAAATGCTTCTTCTGCGCTAGCAACTAAACTTTCAAGCCCAAGTTTTGTGGCAAGAATTTTGGATCATTCTTTGGAACATTCACAATCAAAGTCTAGCCTCATTTGCTCTCTCTGTGTGTGTATTTCTTTGCTGGATTCCAAAAGATCTGAAAGCACGTCTCCCCTTTTTCATTCTTTCCTAAGTCAATACACGTATGAGGCTCCAGTTCCTGTTAACCCAGACACTATTGGTGCAATGCTTAAAAAACTTGGTGACTTGCTTAAGCTTTTGCATGTATCATCCGATGAAAAGGTATTGCCTACAACATATGGAGAATTGAGGCCTCCACTTACAAAGCATCGATTAAAGATAGTTGAGTTTATTGCTGTACTTTTGAAAGCTGGGAATGAATTGGCCGAAGTACAATTGGTCAACTCAGGAATCATTGGACGAGTTATTGATCTTTTCTTTGAATATCCATTCAATAACTCATTACACCATCATGTAGAAAGTATATTACTGTCATGTTTGGAGAGCAAAACTGATGTCGTTGTTGATTATCTTCTTTGGGAATGTGATATAATCGGAAAAGTTCTCGGAGCGGATAAAAATCCTGTTTTTTATAGTGATGGTGACCAGCCAACAGTAGTTGCTGCTGGCAAACGGACACCACGGGCGGGAAACATTGGACATATCACTCGATTTGCCAACAAACTTGTTAACCTGGCTCATAACCAAAGCCGCATACAGGCCTTTCTTCAGGAAAACAACGAGTGGAATGAATGGCAAGCTACAGTTCTACAAGAGCGTAATGTGGTTGAGAATGTTCATCGTTGGGCTTGTGGACGCCCCACTGCATTACAAGATAGGGTGAGGAATAGTGATGACGATGACCTTCATAATGGAGACTACGATGTTGCAGCATTAGCCAATAATTTGAGCCAAGCTTTTAAATACAAAATTTATGGAAATGAGGATAATAAAGAGGACCAGGGAGGGCTTGGTCGAGATGATGAGGATGTCTACTTTGATGATGATTCTGCTGAAGTAGTCATATCGTCTCTAAGACTTGGTGATGATCAAGGAAGTAGCCTTTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAAATGGTAATGCTCCTGAGGGAACATCATCATCTGAGATGATGGAGGAGATTAACTTGCATGGATCTACAAATGGTGGTAACAACAGTAGTGATGATGAGGTAGGGGTAGGGGAGGAAGAGGAATTGGCTGAAAGTAGGAATACCGCAAATGACTCCTATAACATGAGTACGAACTTCTTCAGTGGATCAAGGGATGGCAAATCAAAGAATGGTAGCACTCTAAACTCGGACAGTGAGAAGGCAGGTGCTGCACATGATATGGGATTTTTCAGGTTTGAGGCATCTGAAAACGAGGACCTGTTTGGGGATAGGCCATTACCTCATTGGGTGGGATGGGCTGAACCATTAGACATGAAAGTTCCCGGTTCAAGCACAAATCCCTTTGTTGATCAGGATGATTCTGGTAGCAATCTATCCACTAAATCTGAATTAGGCAGCCCCAATTCTTGTTCACCATCAAATGGGGAATCCCCACCTGCAAATGGTTTGCCAACCCGGGAAGGGGACTCGACTAAAAGATCAGCAGCAGTACCCTCCCTTTTTGAAGATGATGTTGAATTTGTTGGCGTGGAATTAGAAGGTACTGAGAAAGCTATGGAGCAGGCTCTCAAAGAAGGAATAGTTGGGGAAGCGGGACCATTGAAAAGAAATGTTGTCCCGAAAGTGCCAGAAAAGGATAACTCCGAAGAGGGCGAACCCGGAATGAAGGAATTCAACGACGCAAATTACTGGAGGGTTGATCAAGAGGTTGCTGTTCTGGAGTGA 2544 0.4241 MFWKLASLSAPSPVEAILDQENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLHYIVEEPPEDAESKRTFKFPFIACEIFTCEIDDILKTLVEDEELMNLLFSFLEPNRPHSTLLAGYFSKVVVCLMIRKTLPLMNYVRAHQNVFQQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVIQWLVESNLLEMIVDKLSPSSPPEVHANAAETLCTITRNASSALATKLSSPSFVARILDHSLEHSQSKSSLICSLCVCISLLDSKRSESTSPLFHSFLSQYTYEAPVPVNPDTIGAMLKKLGDLLKLLHVSSDEKVLPTTYGELRPPLTKHRLKIVEFIAVLLKAGNELAEVQLVNSGIIGRVIDLFFEYPFNNSLHHHVESILLSCLESKTDVVVDYLLWECDIIGKVLGADKNPVFYSDGDQPTVVAAGKRTPRAGNIGHITRFANKLVNLAHNQSRIQAFLQENNEWNEWQATVLQERNVVENVHRWACGRPTALQDRVRNSDDDDLHNGDYDVAALANNLSQAFKYKIYGNEDNKEDQGGLGRDDEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRNGNAPEGTSSSEMMEEINLHGSTNGGNNSSDDEVGVGEEEELAESRNTANDSYNMSTNFFSGSRDGKSKNGSTLNSDSEKAGAAHDMGFFRFEASENEDLFGDRPLPHWVGWAEPLDMKVPGSSTNPFVDQDDSGSNLSTKSELGSPNSCSPSNGESPPANGLPTREGDSTKRSAAVPSLFEDDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNVVPKVPEKDNSEEGEPGMKEFNDANYWRVDQEVAVLE 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0150 847 MobiDBLite consensus disorder prediction 714 771 - -
Lele12g0150 847 MobiDBLite consensus disorder prediction 611 673 - -
Lele12g0150 847 Pfam SIT4 phosphatase-associated protein 356 490 IPR007587 GO:0019903|GO:0043666
Lele12g0150 847 Pfam SIT4 phosphatase-associated protein 131 352 IPR007587 GO:0019903|GO:0043666
Lele12g0150 847 MobiDBLite consensus disorder prediction 811 833 - -
Lele12g0150 847 SUPERFAMILY ARM repeat 179 417 IPR016024 -
Lele12g0150 847 MobiDBLite consensus disorder prediction 640 672 - -
Lele12g0150 847 MobiDBLite consensus disorder prediction 812 829 - -
Lele12g0150 847 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 810 IPR007587 GO:0019903|GO:0043666
Lele12g0150 847 MobiDBLite consensus disorder prediction 717 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0150 Lele-ChrLele12 1145529 1153666 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0150 12 1145529 1153666 Lele29g0238 29 1377173 1378879 CCT
Lele12g0150 12 1145529 1153666 Lele30g1170 30 14611917 14613701 CCT
Lele12g0150 12 1145529 1153666 Lele31g1311 31 19184351 19186058 CCT
Lele12g0150 12 1145529 1153666 Lele32g0225 32 1346909 1348711 CCT
Lele29g0230 29 1330317 1331904 Lele12g0150 12 1145529 1153666 CCT
Lele30g1180 30 14656876 14658931 Lele12g0150 12 1145529 1153666 CCT
Lele09g1170 09 20781131 20790113 Lele12g0150 12 1145529 1153666 hybridization
Lele10g1145 10 22756102 22766959 Lele12g0150 12 1145529 1153666 hybridization