Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0137 ATGGAAGGGGTTGGTGAGGGAGAGATTGTTGGTGTTTGTGTGCTAGATGTGGGTGCAGTCATTCGCAGGGATGGCTTACATGGCCTGAAGCCCTTTCCTTCCTCTGAAATCAGATTTTCAAATAATAAAGTTTGTTCAGCTGAGAATACATCGACGGCTTACAGTTCTAACCTCCACATTTTCAATAGGAGTTTTTCTTTTGCTAAGATGGATTGTTGTAATTGCTTTGGGTTCATCCGAAAATCTAAACAGCCGAGTGCTATGTTCAGTATCAATAATAATCTCTCTCAGGAGCTGTTATTGGATGAAGACATTGAAGATGACGATGGCTCAAATGATGGTGAGGTTACTAACCTCAGCAGTGGCGATGATAGTGAAGTGCAAATTCGTCCCAACCGGTCTGAGGATATTTTGAAATTGAGAGCAGAGAATGACATGATTTGTAGGCAATTTCCTGTTAAGGAAACTCACAAAGTTATTCGCACAGAGGATGAAAATGGAAACAAGATGATAAATGAGTATATTCGTGAATATAAGATAGGTTCTGGTAGCTATGGGAAAGTGGTTTTGTATCAAAGTTCAGTTGATGGTAAGCACTATGCAATCAAGGTCTTTCACAAGTCTCATTTACTGAAGGTTCGAGTTGCACACTCAGAGACTGCCATGACGGATGTTCTGCGTGAGGTACTCATCATGAAAATGTTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCAGATCACTTTTACATGGTACTTGAATATGTGGAAGGCAAATGGGTCTGTGAGGGTACAGGACCTCTTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGACATTGTTTCAGGATTAATGTATCTACATGCTCATAATATTGTGCATGGGGATATTAAACCTGATAATCTGTTGGTTACTTGCCATGGTAAGGTGAAGATAGGGGATTTCAGTGTCAGCCAGGTATTTGAGGATGATAATGATGAACTTCGTCGGTCCCCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTGGGGGTTCCCTATCATGGTAAAGCTGCAGACACATGGGCAGTAGGGGTTACTTTGTACTGTATGATTCTGGGTGAATATCCATTCCTTGGTGATACTCTTCCGGATACTTACGATAAAATAGTCAATACCCCTTTAGTCCTACCAGATAATTTGAACCTGCAATTGAAAAACTTGCTAGAAGGGCTACTTTGCAAAGATCCAAAACTAAGGTTGCCATTAGGGGATGTTGCAAAGCATTGCTGGGTTATAGGAGACTATGGGCCAATTCCTCAGTACTTGTGCTTCTGTAAGCGAAAGAGGTTGAAGAGGGAAGACTTAGATAGGAGCAATATACTTGCTTGA 1401 0.4154 MEGVGEGEIVGVCVLDVGAVIRRDGLHGLKPFPSSEIRFSNNKVCSAENTSTAYSSNLHIFNRSFSFAKMDCCNCFGFIRKSKQPSAMFSINNNLSQELLLDEDIEDDDGSNDGEVTNLSSGDDSEVQIRPNRSEDILKLRAENDMICRQFPVKETHKVIRTEDENGNKMINEYIREYKIGSGSYGKVVLYQSSVDGKHYAIKVFHKSHLLKVRVAHSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGTGPLCGLGEETARRYLRDIVSGLMYLHAHNIVHGDIKPDNLLVTCHGKVKIGDFSVSQVFEDDNDELRRSPGTPVFTAPECCLGVPYHGKAADTWAVGVTLYCMILGEYPFLGDTLPDTYDKIVNTPLVLPDNLNLQLKNLLEGLLCKDPKLRLPLGDVAKHCWVIGDYGPIPQYLCFCKRKRLKREDLDRSNILA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0137 466 FunFam Serine/threonine-protein kinase Ssp1 168 270 - -
Lele12g0137 466 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 128 439 - -
Lele12g0137 466 CDD STKc_LKB1_CaMKK 180 435 - -
Lele12g0137 466 SUPERFAMILY Protein kinase-like (PK-like) 170 445 IPR011009 -
Lele12g0137 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Lele12g0137 466 ProSitePatterns Protein kinases ATP-binding region signature. 180 203 IPR017441 GO:0005524
Lele12g0137 466 Pfam Protein kinase domain 176 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0137 466 Gene3D Transferase(Phosphotransferase) domain 1 275 440 - -
Lele12g0137 466 Gene3D Phosphorylase Kinase; domain 1 168 270 - -
Lele12g0137 466 ProSiteProfiles Protein kinase domain profile. 174 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0137 466 SMART serkin_6 174 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0137 466 MobiDBLite consensus disorder prediction 106 127 - -
Lele12g0137 466 FunFam Serine/threonine-protein kinase GRIK2 164 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0137 Lele-ChrLele12 1061578 1070458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0137 180 442 CBL-interacting serine-threonine protein kinases AT5G35410 34.221 7.63e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Lele12g0137 Pkinase 5.7e-54 CL0016