Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0123 ATGGAAATTGATCTGAACCATGCAGTGACTGAGGTTGAAAAGAATGCCTTCTGCGATGGACACTGTGGTGAGCAAGGCGCTTGTGCTTCATGTTTCTGTTCTTCCACTTCTTCATCTTCCAATTCGCCTTCTCCTCGTGTTTCTTCTTCTTATATTGAACTCTGGCATGCTTGTGCTGGCCCTCTCACCTCCCTCCCTAACAAAGGAAATGTAGTTATCTACTTTCCCCAAGGTCATCTTGAACAGCTTGCCTCTTTCTCTCCTTTCTCTCCCATGGATATGCCCACCTATGACCTTCAGCCGCAAATCTTCTGCAGGGTCGTCAATGTCCAGCTTCTTGCCAACAAGGAGAATGATGAGGTTTATACGCAGGTTACTTTGCTTCCCCAGGCAGAGTTAGCAGGGGTGCACTTGGAGGGCCAAGAGCTTGAGAAATTGGGAGCATATGAGGATGAAAATGGAGGATTACCTGCAAAATCAACCCCTCACATGTTCTGCAAAACGCTTACTGCTTCTGATACTAGCACTCATGGGGGTTTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGCTTTCCTCCTCTGGATTATAAGCAGCAAAGACCCTCCCAAGAGCTTGTTGCAAAAGACTTGCATGGGGTAGAGTGGAAATTTCGCCATATTTACAGAGGTCAGCCAAGACGCCATCTTCTCACAACTGGCTGGAGTATTTTTGTCAGCCAAAAGAATCTTGTTTCTGGCGATGCAGTACTCTTTCTGAGGGGTGAAAGTGGAGAACTGAGATTGGGAATCAGGAGATCTGTTCGGCCGAGAAATGGTCTTCCCGAGTCAATTATTGGTGATAAGAATTTCTATCCCAATTTCCTGTCATCAGTGGCTAATGCTATATCCACCGAAAGTTTGTTTCATGTCTTCTACAGCCCAAGGGCAAGTCATGCAGAGTTTGTTGTCCCCTACCAGAAATATGTCAAAAGCATCAAGAATCCAATGACCATTGGGACAAGATTTAAGATGAAATTTGAAATGGAGGAATCTCCCGAAAGAAGGTGTAATGGTGGTATAGTGACTGGAATGCGTGATTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATATTGCTACTAATCATCAAGATCGAATTTCTCCATGGGAGATTGAGCCTTCTGTTTCTCTCCCACCCTTGAGCATTCAGTCATCCCCAAGACTAAAGAAATTGCGGACAGGTCTGCAAGCTCCCACATCAAGTCACCTCATGACTGGTGGCGGTGCATTTATGGACTTTGAGGAGTCTGTAATATCACCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGCATCATACTATTTTGGGCGTGATGCAGTGACCAAAAACCAGCCAGATTTTGAGATGAGTCCCCATGGTCATCCAAATCTTGCATCCACTGGATTAAGAAAAGCTACTGCTGCTGAACTTATGAGGGTTCACCCTTCTAGTTATGCAGGCTTTGCAGAGACTAATAAGTTTCTGAGGGTCTTGCAAGGTCAAGAAATATGTCCATTGCAATCCGTGAAAGGAAAAGCTGATTTTAACCTTGGAGCTTGGGGCAAACCCAATTCCAGCTGCACAACTTTCAACCAACGTCAGCCATCCAAACCCAACTTCAACGCTTTAGGATCAGAAGGCCTTCAAACTGCTTATTTTCCTTTCGGTGACATTCACCGAGCTGGTCAAATTCAAAGTAGCCTGTTGTGCTCTAAACCTGCAAATTTTCAGAGAGAGAATATCCACACTCCTTCCACTCAGGCAGAGCTCTCGACGAAGGAAGTTGGACGGTTGGATCTCTCGAACAAGGATAAGCTGCAGGAGAGTTTTTCTGCTGCTGCTTCTTCTTTAGGAGCAAGTCTAATGATTCCAAATGATGAAAATTTTGAGGGGAAGGTAAATGGCTGTAAGCTATTTGGGTTTCCCTTATCTGGGGAAGGCAACTCTCAGAATTTACAGAACTCTGCTAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGTAGCTTAGTCGGAAGAGCCATTGATCTCTCAAGACTTAGCAGCTACAATGATCTGTTGAGTGAACTTGAGCGACTCTTTGGCATGGAAGGCCTTGTAAAGGATCCTCATAAAGGATGGAGGGTCCTCTACACCGATAGCGAAAACGACATAATGGTCGTAGGAGATGATCCATGGCATGAGTTCTGCAGTGTGGTGTCTAAGATCCATATATATACCCAAGAAGAAGTGGAGAAGATGACAATTTGGATGATCACTGATGATACCCAGAGCTGTTTGGAACAGTCAACAGGAGTAATGGAGGCTTCCAAGTCCTCATCTGTGGGCCAGCCAGATTCTTCTCCAACAGAAGAATAG 2406 0.451 MEIDLNHAVTEVEKNAFCDGHCGEQGACASCFCSSTSSSSNSPSPRVSSSYIELWHACAGPLTSLPNKGNVVIYFPQGHLEQLASFSPFSPMDMPTYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGVHLEGQELEKLGAYEDENGGLPAKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGESGELRLGIRRSVRPRNGLPESIIGDKNFYPNFLSSVANAISTESLFHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRFKMKFEMEESPERRCNGGIVTGMRDLDPYRWPKSKWRCLMVRWDEDIATNHQDRISPWEIEPSVSLPPLSIQSSPRLKKLRTGLQAPTSSHLMTGGGAFMDFEESVISPKVLQGQENTGFASYYFGRDAVTKNQPDFEMSPHGHPNLASTGLRKATAAELMRVHPSSYAGFAETNKFLRVLQGQEICPLQSVKGKADFNLGAWGKPNSSCTTFNQRQPSKPNFNALGSEGLQTAYFPFGDIHRAGQIQSSLLCSKPANFQRENIHTPSTQAELSTKEVGRLDLSNKDKLQESFSAAASSLGASLMIPNDENFEGKVNGCKLFGFPLSGEGNSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFGMEGLVKDPHKGWRVLYTDSENDIMVVGDDPWHEFCSVVSKIHIYTQEEVEKMTIWMITDDTQSCLEQSTGVMEASKSSSVGQPDSSPTEE 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0123 801 Gene3D - 329 401 - -
Lele12g0123 801 Pfam Auxin response factor 291 373 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele12g0123 801 FunFam Auxin response factor 163 267 - -
Lele12g0123 801 SUPERFAMILY CAD & PB1 domains 677 754 - -
Lele12g0123 801 Gene3D - 671 764 - -
Lele12g0123 801 ProSiteProfiles B3 DNA-binding domain profile. 165 267 IPR003340 GO:0003677
Lele12g0123 801 SMART B3_2 165 267 IPR003340 GO:0003677
Lele12g0123 801 SUPERFAMILY DNA-binding pseudobarrel domain 157 272 IPR015300 -
Lele12g0123 801 Gene3D - 163 267 IPR015300 -
Lele12g0123 801 Pfam B3 DNA binding domain 165 266 IPR003340 GO:0003677
Lele12g0123 801 FunFam Auxin response factor 670 764 - -
Lele12g0123 801 CDD B3_DNA 163 265 IPR003340 GO:0003677
Lele12g0123 801 MobiDBLite consensus disorder prediction 778 801 - -
Lele12g0123 801 FunFam Auxin response factor 328 401 - -
Lele12g0123 801 ProSiteProfiles PB1 domain profile. 675 759 IPR000270 GO:0005515
Lele12g0123 801 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 764 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0123 Lele-ChrLele12 990186 994994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0123 47 799 B3 DNA Binding Superfamily AT5G60450 60.317 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele12g0123 B3 1.3e-21 CL0405