Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0119 ATGAACAGGTCACTGGCAGAGTGCTACCAAACGAGCATGATAAGTTTGCTGGCTTACTCTATCAGTGGACCATTGCTTGCATCGACATTGCTTTTCATGTATGAAACAGCACGTGGAGGTGAGCTTTTTAATGGGATGATGGCTGAATGCCCTCGTGAATGTTGTAAATCTGAGGTGACTGTTGATAGCTGCAAAAACTTTTTAGCGCCTGAATTAGTTGAAGTTGTCAACGAAAGGATTAAGGAATCAGCTATCCCTGTTACAGAGAAATTGTATTGCCCATTTCCTAGGTGTTCAGCATTAATGTCGAAGAACGAGGTCTTAGAATACACTAAGACTACATATGTTGGCGATGAAAAATATGGAATAAGGAAATGCATGAAATGTCATCAATTGTTCTGTATCAATTGCAGGGTTCCGTGGCATAAGATCATGACATGTTATGACTATAAAAACTCCAATCCTTTTCGTCATGCAGAAGATTCTAAGCTGAAGTTTCTCGTCTCCAAGGGACGGTGGGGCCAGTGTGTAAAGTGCAATCACATAATTGAACTAGTTGAAGGTTGTTATCATATTACCTGCAGGTACCACCAGTTACACTCCTCTTTACTTCTTAATTCTTAG 624 0.4038 MNRSLAECYQTSMISLLAYSISGPLLASTLLFMYETARGGELFNGMMAECPRECCKSEVTVDSCKNFLAPELVEVVNERIKESAIPVTEKLYCPFPRCSALMSKNEVLEYTKTTYVGDEKYGIRKCMKCHQLFCINCRVPWHKIMTCYDYKNSNPFRHAEDSKLKFLVSKGRWGQCVKCNHIIELVEGCYHITCRYHQLHSSLLLNS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0119 207 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 49 194 IPR031127 GO:0004842|GO:0016567
Lele12g0119 207 Pfam IBR domain, a half RING-finger domain 89 147 IPR002867 -
Lele12g0119 207 SMART ibrneu5 74 147 IPR002867 -
Lele12g0119 207 SUPERFAMILY RING/U-box 159 194 - -
Lele12g0119 207 Gene3D - 145 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0119 Lele-ChrLele12 965118 965940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0119 41 196 C3H Transcription Factor Family AT2G19610 32.692 1.24e-27 106