Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0117 ATGGAGAGCAGTGACGCAAACACTCCTCTTTCACATTCCCCCACTAATTCCTCCTCTTCCCCTGCTCCCACCCCGCAAGTCATCGCAAGCCCCTGCGCTGCTTGCAAGATTCTCCGGCGTCGATGTGCCGACAAATGCGTTTTGGCTCCCTATTTCCCTCCCACCGACCCCGCCAAGTTCACCATCGCCCACCGCGTCTTCGGCGCTAGCAACATCATCAAGTTCTTACAGGAACTTCCGGAGAGTCAGAGAGATGATGCGGTGAGCAGCATGGTGTACGAGGCGAGTGCAAGAATAAGAGACCCCATTTATGGCTGTGCTGGTGCGATATGCCAACTTCAGAAGCAAGTGAATGAGCTTCAGGCACAACTTGCCAAGGCTCAAGCAGAGCTCGTCAACATGCAATTACAGCAAGGCAATCTGGTGGCTCTGATTTGCATGGAAATGTCTCAGACTTCTTTCACTCCTCAGGAATCTGAATCGCCGCAGCATTCCGTTGACAATTTCATTTCAACTCCTCCTCACAACAACGCTTATCAGAGCAATCTTAACTTCTTCGACGACAACAGTAGCTTTAACTCACTGTGGGAGCCTCTCTGGACATGA 606 0.5149 MESSDANTPLSHSPTNSSSSPAPTPQVIASPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRDDAVSSMVYEASARIRDPIYGCAGAICQLQKQVNELQAQLAKAQAELVNMQLQQGNLVALICMEMSQTSFTPQESESPQHSVDNFISTPPHNNAYQSNLNFFDDNSSFNSLWEPLWT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0117 201 Coils Coil 110 137 - -
Lele12g0117 201 Pfam Lateral organ boundaries (LOB) domain 31 128 IPR004883 -
Lele12g0117 201 MobiDBLite consensus disorder prediction 1 25 - -
Lele12g0117 201 ProSiteProfiles LOB domain profile. 30 131 IPR004883 -
Lele12g0117 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 30 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0117 Lele-ChrLele12 949384 950091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0117 27 201 AS2 family AT2G28500 66.667 2.90e-81 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele12g0117 LOB 1.9e-41 No_clan