Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0113 ATGGGAACACTAGAGTACACGAGGTTTATGTGCTTGGTTCAGTTCATTCTACACCAGCAAATTATGTCTAACCAATCACTGGAGAACATGATAGCTTGCTCAAAAGCACAGCAGCAAGAGAGGAAGCCGAGACCTCAGCCAGAAGAAGCACTGAAATGCCCAAGATGTGACTCGACCAACACCAAATTCTGCTACTACAACAATTACAGTCTTTCTCAGCCAAGATACTTCTGCAAGTCATGCAGAAGATATTGGACCAAAGGAGGAACCTTGAGAAATGTTCCAGTGGGTGGAGGCTGCAGGAAGAACAAGAGATCTTCATCATCAAAGAGAGCTCAAGATCAACCACTCAACCCCCATCACCACAACAACCCACTCGCCACCATCCCTTCATTATCTTATGATTCCAATGATCTCACCCTCGCATTAGTTCGGCTCCAGAATCAATCTAGTGGGCAATTGGGTTTTGATGATCATGATCTTTCAATTCTGGGGAATCTCACAAGTTCCCATTTTGATATTCTTGGAAACACCACAAATCCTGGGTTTTTAGATGCATTTAGAAGTGCAGGATTCGTGGAAACCCATCATCATCAACAGAACAATAATTTGCAGAATCTGTATTGTGGATATGGAAATGGGGACATGGGAGAGGTAGTGGACAATGGAAACCACGCAGAGATGATGCTGCCGTATGATCAAGAAATCAACAATGCACCCGCCACAACGCAAGCAGTGTCGGTTACTACTATGAAACAAGAAATAATGTGCAATGGCAGAGAACAAAGTGAAAACAAGGTTTTGTGGGGTCTTCCATGGCAGTTCAATGGGGACATAAACATGGGAGGGATCGATTCAGGAAGAGCAAGTTGGAACAACAATGGTATCGGTTCATCTTGGCATGGTCTTCTCAATAGTCCCCTAATGTAG 930 0.4398 MGTLEYTRFMCLVQFILHQQIMSNQSLENMIACSKAQQQERKPRPQPEEALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSKRAQDQPLNPHHHNNPLATIPSLSYDSNDLTLALVRLQNQSSGQLGFDDHDLSILGNLTSSHFDILGNTTNPGFLDAFRSAGFVETHHHQQNNNLQNLYCGYGNGDMGEVVDNGNHAEMMLPYDQEINNAPATTQAVSVTTMKQEIMCNGREQSENKVLWGLPWQFNGDINMGGIDSGRASWNNNGIGSSWHGLLNSPLM 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0113 309 MobiDBLite consensus disorder prediction 110 130 - -
Lele12g0113 309 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Lele12g0113 309 MobiDBLite consensus disorder prediction 96 130 - -
Lele12g0113 309 Pfam Dof domain, zinc finger 49 105 IPR003851 GO:0003677|GO:0006355
Lele12g0113 309 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Lele12g0113 309 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 209 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0113 Lele-ChrLele12 925317 927722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0113 49 309 C2C2-Dof Transcription Factor Family AT2G28510 44.484 7.78e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele12g0113 zf-Dof 5.1e-34 No_clan