Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0109 ATGCCTGTTCATAAGTTCTCAGTTATAGTCATGGGCAAATCGTACCCTACCGTTAGTGCCGATTACCTCAAGGCCGTGGATAAGGCTAAGAAGAAGCTCAGGGGTATGATTGCCGAGAAGAACTGTGCTCCGATCATGGTCCGAATTGCGTGGCACTCGGCTGGTACCTATGACGTGAAGACCAAGACCGGTGGTCCCTTCGGTACCATGAAGCACCCTGCTGAACTTGCTCACGGGGCTAACAACGGGCTTGATATTGCTGTTCGGCTGTTGGAACCCATCAAGGAACAGTTTCCCATCTTGACCTACGGTGATTTCTACCAGCTGGCTGGTGTAGTCGCTGTTGAGGTCACTGGTGGGCCAGAAATTCCTTTCCACCCCGGAAGAGAGGACAAGCCAGAGCCACCTCCGGAGGGCCGCTTGCCTGATGCCACAAAGGGTTCTGATCATCTGAGGGATGTGTTTGGCCACATGGGGCTTAGCGATCAAGATATTGTTGCTCTCTCCGGTGCTCACACCCTTGGAAGGTGCCACAAGGAACGTTCTGGATTTGAGGGTGCCTGGACTTCCAACCCTCTGATATTTGACAACTCGTACTTCAAGGAACTGTTGTCTGGTGAGAAAGAAGGCCTCCTGCAGTTGCCATCTGACAAAGCACTCCTTACTGACCCCGTATTCCGCCCCCTGGTTGAGAAATATGCAGCGGATGAAGATGCCTTCTTCGAGGATTATGCTGAGGCACATCTAAAACTCTCTGAACTTGGGTTCGCCGATGCATAA 780 0.5205 MPVHKFSVIVMGKSYPTVSADYLKAVDKAKKKLRGMIAEKNCAPIMVRIAWHSAGTYDVKTKTGGPFGTMKHPAELAHGANNGLDIAVRLLEPIKEQFPILTYGDFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGHMGLSDQDIVALSGAHTLGRCHKERSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLPSDKALLTDPVFRPLVEKYAADEDAFFEDYAEAHLKLSELGFADA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0109 259 SUPERFAMILY Heme-dependent peroxidases 15 255 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 Pfam Peroxidase 32 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 ProSitePatterns Peroxidases proximal heme-ligand signature. 164 174 IPR019793 -
Lele12g0109 259 FunFam L-ascorbate peroxidase, cytosolic 142 248 - -
Lele12g0109 259 MobiDBLite consensus disorder prediction 125 147 - -
Lele12g0109 259 CDD ascorbate_peroxidase 15 259 - -
Lele12g0109 259 PRINTS Haem peroxidase superfamily signature 164 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Haem peroxidase superfamily signature 101 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Haem peroxidase superfamily signature 43 57 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Haem peroxidase superfamily signature 119 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 17 255 IPR044831 GO:0004601|GO:0034599
Lele12g0109 259 ProSiteProfiles Plant heme peroxidase family profile. 84 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 Gene3D Peroxidase, domain 2 142 248 - -
Lele12g0109 259 MobiDBLite consensus disorder prediction 123 147 - -
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 22 42 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 140 157 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 43 58 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 180 204 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 206 231 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 119 131 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 100 118 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 75 99 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 61 71 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 PRINTS Plant ascorbate peroxidase signature 158 179 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele12g0109 259 Gene3D - 29 255 - -
Lele12g0109 259 FunFam Cytosolic ascorbate peroxidase 29 148 - -
Lele12g0109 259 ProSitePatterns Peroxidases active site signature. 43 54 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0109 Lele-ChrLele12 912017 914983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0109 101 251 Peroxidase AT4G16270 32.461 3.79e-18 80.9