Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0107 ATGTTCGATCTTAATCTGAATGCCGATTCGACTGATACCTCTCACCACGATGAATCCATCAGGTTCTCCGACGAGCTAACGGAAGCCTCCGGGAATCAAATGGCGAAATCGGGGACTTCCAATTCCTCTAACGTCTGTGCTGACGGGTCCATCAATGGAGGAGATGAGGAATCCTGCTCTACACGCGGTGGGGACTCCTTCACCTTTAATTTCGATATCCTTAAGGAAGATGGCGCGAAAGAAGTCGCAACCAAGGAGCTACTTCTGTTTAGTGAAACTAAAGGAGTGGATGGCGAGTCTGCGAATTGGCAGGGTCAGTCTTTGTCTGCCCTTCCATCGAGAAAGAGCTGGATGAGTCTTTCCTTTGATCATCAGGGTGGTAACGGAGAGATGAAGATGGTCCAGGTTCAGCAGCAACCTCAACAGCAAGTGAAGAAAAGCAGAAGGGGTCCAAGGTCTCGGAGCTCGCCGTACAGAGGGGTCACGTTTTACAGGAGAACTGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAGCAAGTCTACTTGGGTGGGTTTGATACCGCTCATGCCGCTGCCAGAGCCTACGATCGTGCTGCTATTAAGTTTAGGGGAGTCGATGCTGACATCAATTTCAATCTCAATGATTACGAGGAGGATCTTAAGCAGATGAAAAATCTCACCAAAGAGGAATTCGTGCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGTTCAAAATATCGAGGAGTAACACTGCACAAGTGTGGTCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGATAAGGCAGCTATCGAATGCAACGGAAGGGAGGCAGTGACCAACTTTGAATTAAGAACATACGAAGGAGAGAGGAAGCCAGAGGTCATTACTGAAGGTGGCAGTCACAATCTTGACCTCAATTTGCGCATCGCAATACCAGGCAGTGGTCCAGAAGAAAATAGGGGCCATCAGTTACAACCTATCCCAAACAACGTGCATACTGGAAGAAGTTCAAGGAAGGAGATCAATGTTGATTCAGTAAGTTGTGATCTATCGTTGACAAGGCCCGTTGTTACTGAGGAGCGTCCATTTGTATGGAATGGCATCTATCCTAGTTTCTTTCCCAATGAGGAAAAGGTTGAGAGAATCAGTAGAGATCATCCACAGGGACTGCCTCTGCCTCAATGGGGTTGGCAAACGCAAGGCCAGGTTACTGCAACGCCAGTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCTATTTCGGCTACCTTTCCATTGGCTAACATCTTTCCACCAAAATTTTTGAGCTTGAGCTCAATTCCCCATAATAATATCTGTTTTGATCCATCTAGTGCAGCTGGAAGCAACACAACTCAACATTGCCAGATGAAGTCCCCGCAAGTACCCCACTAG 1488 0.4751 MFDLNLNADSTDTSHHDESIRFSDELTEASGNQMAKSGTSNSSNVCADGSINGGDEESCSTRGGDSFTFNFDILKEDGAKEVATKELLLFSETKGVDGESANWQGQSLSALPSRKSWMSLSFDHQGGNGEMKMVQVQQQPQQQVKKSRRGPRSRSSPYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLNDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIECNGREAVTNFELRTYEGERKPEVITEGGSHNLDLNLRIAIPGSGPEENRGHQLQPIPNNVHTGRSSRKEINVDSVSCDLSLTRPVVTEERPFVWNGIYPSFFPNEEKVERISRDHPQGLPLPQWGWQTQGQVTATPVPPFSTAASSGFSISATFPLANIFPPKFLSLSSIPHNNICFDPSSAAGSNTTQHCQMKSPQVPH 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0107 495 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 125 343 - -
Lele12g0107 495 FunFam AP2-like ethylene-responsive transcription factor 248 308 - -
Lele12g0107 495 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Lele12g0107 495 FunFam AP2-like ethylene-responsive transcription factor 156 215 - -
Lele12g0107 495 MobiDBLite consensus disorder prediction 1 20 - -
Lele12g0107 495 CDD AP2 248 306 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 CDD AP2 158 212 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 SMART rav1_2 249 312 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 ProSiteProfiles AP2/ERF domain profile. 249 306 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 MobiDBLite consensus disorder prediction 133 158 - -
Lele12g0107 495 PRINTS Ethylene responsive element binding protein signature 288 308 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 PRINTS Ethylene responsive element binding protein signature 250 261 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 MobiDBLite consensus disorder prediction 339 362 - -
Lele12g0107 495 MobiDBLite consensus disorder prediction 29 49 - -
Lele12g0107 495 Gene3D AP2/ERF domain 157 215 IPR036955 GO:0003700|GO:0006355
Lele12g0107 495 Gene3D AP2/ERF domain 248 308 IPR036955 GO:0003700|GO:0006355
Lele12g0107 495 Pfam AP2 domain 248 297 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 Pfam AP2 domain 158 205 IPR001471 GO:0003700|GO:0006355
Lele12g0107 495 SUPERFAMILY DNA-binding domain 248 307 IPR016177 GO:0003677
Lele12g0107 495 MobiDBLite consensus disorder prediction 347 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0107 Lele-ChrLele12 900743 904340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0107 105 331 AP2-EREBP Transcription Factor Family AT4G36920 71.610 8.16e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele12g0107 AP2 3.4e-09 CL0081