Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0104 ATGTGGAAGTGCGGCTCCGTTTTCTTGGTGTACGTAGGACTAAGCGGGATTATGGGTTGCTTTTGTTTTGCAAAGAAATCAAGCAGAAAATCGCAGGCCAACAACCACAGCCAGAGCGCGAAGCCTAGCAATCGCACGGATAAAGTGAAATTTGATTCGAATGTAAATGCGGCGAAGGAAGCTCAGTCTAAGGATGATCAACTTTCCTTGGACGTGAAGAGATTGAATTTAACGGACAATGGAGCCACTACTGGTAGCACAGCGCAGACTTTTTCTTTCGATGAACTTGCAGCAGCAACAGGAAATTTTAGGTCAGATTGCTTCCTGGGAGAAGGAGGGTTTGGCAAGGTTTACAAGGGGCATTTGCAGAGAATAGACCAGGTTGTGGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGAATTCGCGAATTCGTTGTTGAAGTTTTGACACTTAGTCTAGCAGACCACCCTAATCTTGTGAAATTGATTGGGTTTTGTGCTGAAGGAGATCAGAGACTATTGGTTTATGAGTACATGCCATTAGGATCTTTGGAGAACCACTTGCATGATCTTCCACCCGGTAGAAAACCACTTGATTGGAATACGAGAATGAAAATAGCAGCTGGAGCTGCGAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCTCCTGTCATATACCGCGATTTGAAATGCTCAAACATTTTATTAGGTGAGGGATATCATCCTAAGTTATCTGATTTCGGCTTGGCCAAAGTGGGCCCAAGTGGCGATAAGACACATGTTTCAACAAGGGTTATGGGTACATATGGTTACTGTGCTCCGGATTATGCCATGACGGGTCAGTTAACGTTCAAGTCAGACATCTACAGCTTTGGAGTTGTTCTTTTGGAGCTCATCACCGGCAGGAAAGCCATTGATAATGCTAGACCTGCCAAAGAACAAAATCTGGTTGCATGGGCAAGGCCGTTGTTCAAAGACAGGAGAAAATTCTCGCACATGGTAGACCCATTGCTCGAAGGCGAATATCCTGTGAGAGGTTTGTACCAAGCTCTAGCTATTGCCGCCATGTGTGTTCAAGAGCAACCTAATATGCGGCCAGTGATAACCGACGTGGTTACCGCGTTAAACTACCTCGCCTCCCAGAGATATGATCCCCAAATTCATCAAGTACGGAACTCCAAAAGAAGGGATGGTGATCAAAGCCATCATATGCAGCAAAGGACCTCAAGTGCGAATTCTCGCGGCTCTGGCGAGCACAGAGCCATCAACGTCGCTGATCCTCCACAAAGAAAGCGAAGAAGAACAGAAGGTGATGATACGTCCGGCCTTCCACTTTACGATACGCGGAGCACCGATGGAAAGAGGCTGGTTTCCTTGTCACGATCTGCAGGGAAATGGCTTCACGCTATTCCTCTTATTCTGCTGCTTTGCCTTTTCCTCCTTTGGTTGAATTACTTTCCAGTTAGAGATGGTAGAACTACATTCATACGTCAGATTCATGCACCGCTGCCTAACACTACCCATATTGATCTCACCATACTAGCAGCGTCTGCCACACCAATCTCGTCATTTCCTGAAAATCTGTCATACGACAATGAAACTTCCTTGCATTTGGGGAGTGCGCCTAATTGA 1638 0.4585 MWKCGSVFLVYVGLSGIMGCFCFAKKSSRKSQANNHSQSAKPSNRTDKVKFDSNVNAAKEAQSKDDQLSLDVKRLNLTDNGATTGSTAQTFSFDELAAATGNFRSDCFLGEGGFGKVYKGHLQRIDQVVAIKQLDPNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPLGSLENHLHDLPPGRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNARPAKEQNLVAWARPLFKDRRKFSHMVDPLLEGEYPVRGLYQALAIAAMCVQEQPNMRPVITDVVTALNYLASQRYDPQIHQVRNSKRRDGDQSHHMQQRTSSANSRGSGEHRAINVADPPQRKRRRTEGDDTSGLPLYDTRSTDGKRLVSLSRSAGKWLHAIPLILLLCLFLLWLNYFPVRDGRTTFIRQIHAPLPNTTHIDLTILAASATPISSFPENLSYDNETSLHLGSAPN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0104 545 ProSiteProfiles Protein kinase domain profile. 103 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0104 545 MobiDBLite consensus disorder prediction 390 405 - -
Lele12g0104 545 SMART serkin_6 103 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0104 545 CDD STKc_IRAK 109 378 - -
Lele12g0104 545 Pfam Protein kinase domain 108 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0104 545 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Lele12g0104 545 Gene3D Transferase(Phosphotransferase) domain 1 180 404 - -
Lele12g0104 545 MobiDBLite consensus disorder prediction 426 442 - -
Lele12g0104 545 Gene3D Phosphorylase Kinase; domain 1 74 179 - -
Lele12g0104 545 SUPERFAMILY Protein kinase-like (PK-like) 89 393 IPR011009 -
Lele12g0104 545 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lele12g0104 545 FunFam probable serine/threonine-protein kinase RLCKVII 76 179 - -
Lele12g0104 545 MobiDBLite consensus disorder prediction 390 449 - -
Lele12g0104 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Lele12g0104 545 FunFam Serine/threonine-protein kinase PBS1 180 395 - -
Lele12g0104 545 PANTHER OS07G0668900 PROTEIN 22 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0104 Lele-ChrLele12 863055 868165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0104 18 382 Glycoside Hydrolase AT3G07070 56.911 2.27e-148 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele12g0104 Pkinase 7.2e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1216 09 21085582 21088472 Lele12g0104 12 863055 868165 hybridization