Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0087 ATGGTTCAACAAGAATTCCGGAAAGGTCCATGGACAGAACAGGAGGACATCAAATTGGTCTCGTTTGTTAGCTTGTTTGGAGACCGAAGGTGGGATTTTATAGCCGAAGTTTCAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTATCTGCATCCTGGTCTCAAACGGGGTAAGATGACGCCGCAAGAAGAGCGCCTCGTGCTGGAGCTTCACGCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAATTGCCAGGGCGCACAGATAATGAGATTAAGAATTACTGGAGGACTTACATGAGGAAGAAGGCCCAGGAGACAAAGCGAGTTGCCACTCCATCATCAACTTCTAGTTGTCATTCTTCACTATCATCAAATAATCGAGCAGTGGGTTCACATCCTTCCAACGAGAGTGGAGAAGAAAGCTTTTATGATACAGGAGGGCCTAATATGATTGACTCAACAGAAATCAAGATAGGGGGAGAACAAGGTGAACAGTGTTACTCCATGGAGGACATATGGAAGGATATTGCTATGTCCGAAGAGAATGTTCAGAATCCAGTCCATGCTAGTGCTAGGCGTATCGAAGAGGAGTGCAAATTCTTTTGTCCTCATCTGCCATCTCCTTCTTGGGAGTATTCTTCAGAATCGCTGTGGGTTATGGATGAAGAAGAAAGTAAGACGTTTCTCCCTTCAAGTGATCAATTCTTTTCCAGTTTCGAACATGGGGCAGCATTTCTAACTGGCTAA 768 0.4466 MVQQEFRKGPWTEQEDIKLVSFVSLFGDRRWDFIAEVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTYMRKKAQETKRVATPSSTSSCHSSLSSNNRAVGSHPSNESGEESFYDTGGPNMIDSTEIKIGGEQGEQCYSMEDIWKDIAMSEENVQNPVHASARRIEEECKFFCPHLPSPSWEYSSESLWVMDEEESKTFLPSSDQFFSSFEHGAAFLTG 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0087 255 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lele12g0087 255 Gene3D - 63 134 - -
Lele12g0087 255 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 139 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele12g0087 255 CDD SANT 10 55 IPR001005 -
Lele12g0087 255 Gene3D - 8 60 - -
Lele12g0087 255 SMART sant 60 108 IPR001005 -
Lele12g0087 255 SMART sant 7 57 IPR001005 -
Lele12g0087 255 CDD SANT 63 106 IPR001005 -
Lele12g0087 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Lele12g0087 255 MobiDBLite consensus disorder prediction 112 161 - -
Lele12g0087 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Lele12g0087 255 FunFam MYB transcription factor 63 129 - -
Lele12g0087 255 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Lele12g0087 255 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Lele12g0087 255 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Lele12g0087 255 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Lele12g0087 255 FunFam Myb transcription factor 8 60 - -
Lele12g0087 255 MobiDBLite consensus disorder prediction 115 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0087 Lele-ChrLele12 743763 744769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0087 1 253 MYB Transcription Factor Family AT5G59780 60.311 1.82e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele12g0087 Myb_DNA-binding 1.4e-15 CL0123