Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0071 ATGCTGTGCTTGGAACTTGGCTTTGGTGAACACACCACTCAAATAATTGCGATATGTTTAGTGTCTTGTGTTTCGTCGTGCAAAAACTCTGTAGGGTTTATTATTTGCCCCAACTTTGATAATGATGATGCCCATGGTCATGGTACAATTGGCATATCGGTTTACTGAGGCAACAAGGGTACGCGATTAAGTCTCCTTTCTGGCATGGGTGTTTGTTTGAGCGCCCAAATTAAAGCAGAGAGCCCATGCAACACAGGGTTAGATTCAAAATATGTGAGTAGTGACGGAAAGGATGGTAGCAGCACGGGAAGCAAGGTGTCGGCGGTGTCAGTTCCTCAGACTCCGAGGAGTGAGGGAGAGATCTTGCAGTCATCTAATTTAAAGAGTTTCACTTTATCAGAATTGAAGGCGGCCACCAGAAATTTCTGTCTAGATAGTGTGTTAGGAGAAGGTGGCTTTGGATCAGTGTATAAAGGGTGGATCGATGAGCACTCTTTGATTGCTGCCAAACCTGGGACCGGCATGGTTATTGCTGTCAAAAGACTTAATCAAGATGGTTTTCAAGGTCACAAGGAGTGGCTGGCGGAAGTGAACTACCTTGGACAGCTTTCTCATCCTCATCTGGTGAAATTAGTTGGTTATTGCCTGGAAGATGAACATCGTCTTCTGGTGTATGAATTCATGCCTCGAGGCAGCTTAGAGCATCATTTGTTCAGAAGAGGTTCATATTTTCAACCTTTGTCGTGGAGCCTGCGGATGAAGGTTGCTCTTGGTGCTGCAAAAGGCCTTGCGTTTCTTCACAGCGGCAACGTCAAAGTGATATACCGGGATTTCAAGACTTCTAATGTCTTACTGGATTCAAAATATAATGCAAAGCTTTCTGATTTTGGGCTGGCAAAAGATGGACCAACGGGTGACAAGAGTCATGTCTCAACCAGGGTCATGGGAACCTATGGATACGCAGCTCCTGAATATCTAGCCACAGGCCACCTGACGGCGAAGAGCGATGTGTATAGTTTTGGAGTTGTGCTACTGGAAATGTTATCGGGACGACGAGCTGTTGATAAGAATAGGCCATGTGGTCAGCACAATTTGGTGGAATGGGCTAAGCCATGTCTGACAAACAAACGGAAGATCTTTCGCATTATGGACAGTCGTCTGGAAGGTCAGTATTCGATCGATGAGGCTCTTAAGACGGCAATGCTAGCGCTACGATGCCTCTCCGGCGAGCCCAAGATAAGGCCTGACATGGACGAGGTTGTCAAAGCTCTGGAGCAGCTCCAAGTCTCCGTTGACGAAAATGGAAGCCATCGTAACTCTGGGTCTCGTGCCCGGAGAAGAAGTGCCGATGACTTTAACAGTCGGACGGCTTATCCCAGGCCCTCTGCTTCTCCACTCTACGCTTGA 1407 0.4712 MLCLELGFGEHTTQIIAICLVSCVSSCKNSVGFIICPNFDNDDAHGHGTIGISVYXGNKGTRLSLLSGMGVCLSAQIKAESPCNTGLDSKYVSSDGKDGSSTGSKVSAVSVPQTPRSEGEILQSSNLKSFTLSELKAATRNFCLDSVLGEGGFGSVYKGWIDEHSLIAAKPGTGMVIAVKRLNQDGFQGHKEWLAEVNYLGQLSHPHLVKLVGYCLEDEHRLLVYEFMPRGSLEHHLFRRGSYFQPLSWSLRMKVALGAAKGLAFLHSGNVKVIYRDFKTSNVLLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPCGQHNLVEWAKPCLTNKRKIFRIMDSRLEGQYSIDEALKTAMLALRCLSGEPKIRPDMDEVVKALEQLQVSVDENGSHRNSGSRARRRSADDFNSRTAYPRPSASPLYA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0071 468 PANTHER OS01G0588500 PROTEIN-RELATED 106 428 - -
Lele12g0071 468 MobiDBLite consensus disorder prediction 438 453 - -
Lele12g0071 468 ProSiteProfiles Protein kinase domain profile. 142 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0071 468 SUPERFAMILY Protein kinase-like (PK-like) 116 424 IPR011009 -
Lele12g0071 468 Gene3D Transferase(Phosphotransferase) domain 1 228 450 - -
Lele12g0071 468 ProSitePatterns Protein kinases ATP-binding region signature. 148 180 IPR017441 GO:0005524
Lele12g0071 468 Gene3D Phosphorylase Kinase; domain 1 117 227 - -
Lele12g0071 468 Pfam Protein tyrosine and serine/threonine kinase 144 424 IPR001245 GO:0004672|GO:0006468
Lele12g0071 468 CDD STKc_IRAK 148 427 - -
Lele12g0071 468 MobiDBLite consensus disorder prediction 431 468 - -
Lele12g0071 468 FunFam Probable serine/threonine-protein kinase PBL8 228 444 - -
Lele12g0071 468 FunFam Serine/threonine-protein kinase BIK1 109 227 - -
Lele12g0071 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0071 Lele-ChrLele12 616948 622808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0071 117 432 Glycoside Hydrolase AT3G07070 50.314 7.80e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele12g0071 PK_Tyr_Ser-Thr 1.6e-45 CL0016