Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0070 ATGAAGTGCTTCCATTTCTCAAACGGGGGACCAGATCCCCGAGAAGACGATGACTCTGTTACCTCCAAGGCTTCCAAGCTCTCCTGGGCTCGCTCACTCAGCGTCGCTTCTTCTACCTTGGGCTCAAGGAGGTCTGAATTTGATTCTGATTCAAAGGACTTCTCCGATGCAGTTGAGTTCCATAAATTCTTGTCTCAGCGGCGAGCTAATGATTTGCGCGTTTTTTCCTTCTCTGAGCTTAAATTGGCAACTCGTGGATTCAGTAGAGCCCTTTTGATTGGAGAGGGAGGGTTTGGTTGTGTCTACAAAGGGGTTCTCAGGGTACCCGGCGAGCATGCAAATGACGGTTCTCTTTCCAATATGGATGTTGCGATCAAGCAATTGAACCGTAATGGACCCCAGGGACACAGGGAATGGATCAATGAAGTAAACTTGTTGGGTGTAATCAAGCATCAAAATCTTGTGAAGCTAGTGGGATATTGCGCTGAAGATGATGAGAGGGGAATTCAGCGGCTTCTAGTCTATGAGCTTATGCAGAATAAAAGCTTGGAAGATCATCTTTTGGGTCGAGTGCCATCAACACTTACATGGATAGCAAGATTGAAAATTGCTCAAGATGCTGCCCGTGGATTGGCATATCTACATGAAGAAATGGATTTTCAGCTTATTTTTCGGGATTTTAAGACATCCAATGTCCTGCTGGATGAGGACTTCAATGCGAAGCTTTCTGATTTCGGACTTGCTAGGCAAGGACCCTCAGAAGGATTTGGACATGTTTCAACCTCTGTTGTGGGGACTATTGGTTATGCTGCACCGGAGTATGTTCATACCGGTAAGTTAACTGCTAAGAGTGATGTTTGGAGCTTTGGTGTAGTTCTTTATGAACTTATCACTGGGAGGCGAGCTGTTGAGAGAAACCTACCGAGAAATGAACAAAAGCTTCTGGAATGGGTAAGAAATTATGTTTCTGACCCTAGAAAGTTCCATCTTCTGGTAGACCCACGACTTGAAGGACACTATTGCATCAAATCAGCTAAAAAACTTGCAACCCTAGCAAACAAGTGTCTTACAAAGCACCCGAAGAACCGTCCTAAAATGAGTGAAGTGGTTGAGATTCTTGGAAGCATAATTAACGAGACAATTTCTCAGTTTGAATGCAGTCTTCAAGCTGTTGCAAGTGAAGAAAAAGAAGAGAAGTTGTCTGAAGAGGACACTGAATCTGGGGCGGCTAAACAAGGGAATAATTATCTGAAGAAGGTGTTGGACTTCAGAGAAATGATGAATTTAAGAAACAAGTCCATTAGAAGGTTGGATTGGAAAAATTGGGCGCCTGGTTTGGTGCGAACTTGGTGA 1353 0.4405 MKCFHFSNGGPDPREDDDSVTSKASKLSWARSLSVASSTLGSRRSEFDSDSKDFSDAVEFHKFLSQRRANDLRVFSFSELKLATRGFSRALLIGEGGFGCVYKGVLRVPGEHANDGSLSNMDVAIKQLNRNGPQGHREWINEVNLLGVIKHQNLVKLVGYCAEDDERGIQRLLVYELMQNKSLEDHLLGRVPSTLTWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNVLLDEDFNAKLSDFGLARQGPSEGFGHVSTSVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRNYVSDPRKFHLLVDPRLEGHYCIKSAKKLATLANKCLTKHPKNRPKMSEVVEILGSIINETISQFECSLQAVASEEKEEKLSEEDTESGAAKQGNNYLKKVLDFREMMNLRNKSIRRLDWKNWAPGLVRTW 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0070 450 Pfam Protein tyrosine and serine/threonine kinase 93 373 IPR001245 GO:0004672|GO:0006468
Lele12g0070 450 Gene3D Transferase(Phosphotransferase) domain 1 178 399 - -
Lele12g0070 450 FunFam Serine/threonine-protein kinase BIK1 55 177 - -
Lele12g0070 450 ProSiteProfiles Protein kinase domain profile. 87 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0070 450 Gene3D Phosphorylase Kinase; domain 1 67 177 - -
Lele12g0070 450 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 387 - -
Lele12g0070 450 PANTHER OS01G0588500 PROTEIN-RELATED 47 375 - -
Lele12g0070 450 ProSitePatterns Protein kinases ATP-binding region signature. 93 126 IPR017441 GO:0005524
Lele12g0070 450 SUPERFAMILY Protein kinase-like (PK-like) 69 373 IPR011009 -
Lele12g0070 450 MobiDBLite consensus disorder prediction 1 22 - -
Lele12g0070 450 CDD STKc_IRAK 93 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0070 Lele-ChrLele12 613078 615493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0070 73 402 Glycoside Hydrolase AT3G07070 47.399 1.29e-95 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele12g0070 PK_Tyr_Ser-Thr 9.2e-47 CL0016