Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0062 ATGGCTTCCAATGTCCTTCCTTTATCTTTCGTCTCTCCAACCGAACTGGTGGGACCCCCCAAGCTGCGCATCACAGGGATTGATCTCCCACAACCAGGTTTGAGGCCGGCAGAGAGTCCAAGAGACAGGGCGGCACCTCGCGAGGAATGGGAAACCATCAAGGTTGAAGACCTGAAGATAAAGAAAGATGAGCTCGTGGTTGTGAATTGTCAGAAGCGATTTAAGAATTTTCTTGATGAGACAGTCGTGGTGAATAGTCCTAGAGACACTGTTTTAAAGTTAATTAGGAAGGCAAACCCCAGGATGTTTGTGCAGACTATAGTCAATGGGTGCTATAATGCGCCATTCTTCGTGACGCGATTCCGGGAGGCTCTGATCCATTACTCCTCAATGTTTGATATGCTTGTCACTAATGCTGATGGTGAAGATCCAATGAGGTTGCTGTTTGAAAAGGAGTTTCTTGGAAAAGATATAACGAATATCATAGCTTGTGAGGGTTTTGAGAGGACAGAGAGGCCTGAGACGTACAAGCAATGGCAGGTCTGGAACATGAGGGCAGGGTTCAGGCAGCTGCCATTGGATCGCCAACTCGTCGGTAAATTAAGAGGCAAGTTGAGACAAGTGATCCACGGTGACTTCATGCTCGCTGAAGACGGAAATTGGATGCTAGCTGTTGTTCCTGTGGGAATGAAGGAGAATAAAAGGCTAAACAGCAGCAAACACAATGCACAGAGGAATGCAATCACAACTCAGAACTAA 759 0.4677 MASNVLPLSFVSPTELVGPPKLRITGIDLPQPGLRPAESPRDRAAPREEWETIKVEDLKIKKDELVVVNCQKRFKNFLDETVVVNSPRDTVLKLIRKANPRMFVQTIVNGCYNAPFFVTRFREALIHYSSMFDMLVTNADGEDPMRLLFEKEFLGKDITNIIACEGFERTERPETYKQWQVWNMRAGFRQLPLDRQLVGKLRGKLRQVIHGDFMLAEDGNWMLAVVPVGMKENKRLNSSKHNAQRNAITTQN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0062 252 Pfam GRAS domain family 48 223 IPR005202 -
Lele12g0062 252 ProSiteProfiles GRAS family profile. 1 242 IPR005202 -
Lele12g0062 252 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 214 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0062 Lele-ChrLele12 558817 561351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0062 18 223 GRAS Transcription Factor Family AT1G07530 55.605 3.11e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele12g0062 GRAS 1.5e-41 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1257 09 21369406 21371712 Lele12g0062 12 558817 561351 hybridization
Lele10g1232 10 23393162 23394428 Lele12g0062 12 558817 561351 hybridization