Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0061 ATGGATCCAAATTTGCCTGCAGATCGTGATTTCCTGAACGGACACAAAATAGATGATGGCACCGTCTTCTCTGATACGAATCAATACCTGAATCAAGGAGATGAATGGAATCCTGATGAAAACCATCAGAACGTTCTTAATTTCTACCGTCATATTTTTCATCAACCTCATGTGGACCCACTTAGTTATGCTCCGCAGGCAAGCTTGATTTCTGAAGGAGCACCGCCGAATCCACCTGTGGAAGGTGTGCCAGATGTCCCGTTTTCAGCCGCGACTTCAGCTCCGGATCCTTCTCTGGAAGACTACGATTTTTCAGAAACCATCAAGTACATGAGCCAAGTTCTTATGGAAGAGAACTTGGAACAGAAGCCGTGCATGTTTTATGATCCACTCAGTCTAAAACTTACTGAGAAATCATTCTATGATGCCCTTCGATACAACGACACTCTCTCCCCTAATGAGCACCCTCTCCTTGACATTGTTGAGAGCCCAGATGGTAATTCCTCTGGAACTGCTACTGATTCTAGTACGGGCGGCACCAGCACCGGCACCAGCACCAGCACCAGCAGCAACGACTCAGAATTAAGGCCCTCTTCGTCAGAGACCGCTACTTTGGGGGATTATGCTTTCCAGTTCAAAGCGCAATCCATATCTCCGCAATCCTCACAACCTTCAAATACTTCAATTACTATCAGTGATGGACTGCTGAATTTGGATTCTTCTATTACTCAGCTTTTGGCTCAAAATATCTTCAGTGATGCAGAATCTGTCTCGCAATTTAATAGAGGCCTAGAGGAAGCTAGCAAATTTCTTCCTAAAGGAGCTCAACTCGTCACTGGTCTGCAGAGCACCACAGTGTCTGTACGGTCAAAGGGAATGGGAGAAAAGGCGGCGCGGAATATAGAGAAAGATGCTAGGGAGAATTTGCATGGGTTGAAGGGCAGAAAGAATCATGACCGTGATGATAGTGTTGATGAAGAAGAAGAAAGGAGAAGCAGCAAGCAGTCAGCAGTGTATGTTGATGAGAGTGATGAATTATCGGAGATGTTTGACAAAGTGTTGCTTAGTGTTGAGAATGTTCCATTATGTGCAGAGCACGAAAGCTTGCCCCATGGATCAGCGAAAGACGTGCAGCCAAGCGAGCAGGCTGTGGAATCATCAGATGGAGGGAAGACGCGCTCTAAGAAACAAGGCAAGAAGAAGGAAACGGTGGATTTGAGGACACTTTTGGTTTTATGTGCTCAAGCTGTGTCTGCCAACGATAGCAGGACTGCTCATGAGTTACTAAAGCAGATCAGGCAACATTCTTCACCCTTCGGGGATGCATCTCAGAGGGTGGCTCATTATTTCGCCAATGGCCTTGAGGCACGTTTGGTAGGCGGTGGTGCTGGAACCCAGCTATTTTATACTTCTCTGAGCTCCAAGAGGATGCCTGCTGCTGAAATTTTGAAAGCTTACCAAGTTTCAATATCTGCCTCACCTTTTAAGAAGTTTGCACATTTCTTCGCAATAAAAATGATTTTAAAAGCAGCTGAAAAGGCAGAAACCCTCCATATTGTTGATTTTGGTATCCTATATGGTTTCCAGTGGCCAATGCTTATCAAATTTCTTTCAAATAGAGCCGGTGGACCTCCCAAGCTACGAATCACCGGAATAGAATTTCCCCAACCTGGCTTTCGTCCGGCAGAAAGAATTGAGGAAACTGGTCGTCGTCTTGCTAATTATTGCAGTCGCTTTGATGTTCCCTTTGAGTACAAAGCTATAGCATCAAAAAACTGGGAAACCATCCAAATTGAAGACCTTAAGATTGAGAGGAATGAGTTCCTTGCTGTGAACTGTTTGCTGAGGTTCAAGAATTTACTGGACGATACAATTGAAGTGAATAGTCCTAGGAATGCAACTCTAAATCTGATAAGGAAGATGAAACCGGATCTCTTTATTCAATCCATTCTTAATGGATCCTACAATGCCCCTTTCTTTGTTACGCGGTTCAGGGAGGCACTGTTCCATTTCTCCGCGCTGTATGATATGTTTGATACTTTGGTACCCCGGGAAAACCAATGGAGGTTGATGCTCGAGAAAGAATTTTACGGTCGGGAGGCCATGAACGTTGTGGCATGTGAAGGATTTGAAAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCAAGGGTTGCAAGGGCAGGTTTCAAGCAGCAGCCACTGAATAAGGAGCTTATGGCCAAGTTCAGGGAAAAGATGGAGGCATGGTACCATAAAGATTTTGTGTTTGATGTAGACAGCAACTGGATGCTTCAGGGCTGGAAGGGACGCATTTTGTATGCTTCCACTTGCTGGGTTCCAGCATAA 2352 0.4515 MDPNLPADRDFLNGHKIDDGTVFSDTNQYLNQGDEWNPDENHQNVLNFYRHIFHQPHVDPLSYAPQASLISEGAPPNPPVEGVPDVPFSAATSAPDPSLEDYDFSETIKYMSQVLMEENLEQKPCMFYDPLSLKLTEKSFYDALRYNDTLSPNEHPLLDIVESPDGNSSGTATDSSTGGTSTGTSTSTSSNDSELRPSSSETATLGDYAFQFKAQSISPQSSQPSNTSITISDGLLNLDSSITQLLAQNIFSDAESVSQFNRGLEEASKFLPKGAQLVTGLQSTTVSVRSKGMGEKAARNIEKDARENLHGLKGRKNHDRDDSVDEEEERRSSKQSAVYVDESDELSEMFDKVLLSVENVPLCAEHESLPHGSAKDVQPSEQAVESSDGGKTRSKKQGKKKETVDLRTLLVLCAQAVSANDSRTAHELLKQIRQHSSPFGDASQRVAHYFANGLEARLVGGGAGTQLFYTSLSSKRMPAAEILKAYQVSISASPFKKFAHFFAIKMILKAAEKAETLHIVDFGILYGFQWPMLIKFLSNRAGGPPKLRITGIEFPQPGFRPAERIEETGRRLANYCSRFDVPFEYKAIASKNWETIQIEDLKIERNEFLAVNCLLRFKNLLDDTIEVNSPRNATLNLIRKMKPDLFIQSILNGSYNAPFFVTRFREALFHFSALYDMFDTLVPRENQWRLMLEKEFYGREAMNVVACEGFERVERPETYKQWQARVARAGFKQQPLNKELMAKFREKMEAWYHKDFVFDVDSNWMLQGWKGRILYASTCWVPA 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0061 783 MobiDBLite consensus disorder prediction 295 338 - -
Lele12g0061 783 MobiDBLite consensus disorder prediction 152 201 - -
Lele12g0061 783 MobiDBLite consensus disorder prediction 289 343 - -
Lele12g0061 783 ProSiteProfiles GRAS family profile. 397 781 IPR005202 -
Lele12g0061 783 Pfam GRAS domain family 406 780 IPR005202 -
Lele12g0061 783 MobiDBLite consensus disorder prediction 369 400 - -
Lele12g0061 783 MobiDBLite consensus disorder prediction 164 201 - -
Lele12g0061 783 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 336 776 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0061 Lele-ChrLele12 555882 558233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0061 107 783 GRAS Transcription Factor Family AT1G07530 53.067 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele12g0061 GRAS 1.4e-109 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1442 31 19913176 19914368 Lele12g0061 12 555882 558233 CCT
Lele09g1258 09 21375989 21380561 Lele12g0061 12 555882 558233 hybridization
Lele10g1233 10 23396357 23398702 Lele12g0061 12 555882 558233 hybridization