Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0055 ATGGCGGATATATGCTGCAGAGTGGTCAGCGAGAATGAGACATCGGGGGCGTGTCAGCCGAGCTCGCGTGTAGCCAGGAGGAGGAGAATGGAGATCAGGCGATTCAAGGTGGTAGAAGGCGAGGAGAAGCGCCCTAAACTCCACCTTGCTTCCCGCTCCTTGTCTCGCAACTGTGAGAATGCTGTGGAGAACTGTGCTTCTGGCATAGAGAAAGCCCTCGCGTTTTTATCCCCCAACCCAGGAAAATCAGAGACCCATCACAAACAAACTTCGGGTGACTCCTTCGACCCTGCGCACTCTCCAGTTTTGGTGCGGCAGTGTCCTAAATTTGGGGTTGCATCGGTGTGTGGAAGGCGAAGAGATATGGAGGATGCCGTGGCAGTTCACCCCTGCTTTTCCCGAGGGGACCATCAATCCGCCGGTGAATTTCATTACTTCGGAGTCTACGATGGCCACGGATGCTCTCATGTGGCGGCTAAGTGTAAGGACCGATTACATGAGTTGGTGAAAGAAGAGCTAGAGCAACAGGAGAGGTCGACGGCGTGGGAGGGTGCGATGGAGCGAAGCTTCTCACGAATGGACCGGGAGGTCATTGCTTGGAATGCTAATGTCTTAGAAGCCAATTGTAGGTGTGAGCTTCAGTCACCCGAGTGCGACGCCGTTGGATCTACGGCTGTTACGGCTATTTTGACCGCCGACAAGATAATCATCGCCAACTGCGGCGATTCGAGGGCCGTGCTCTGCCGCAATGGCAAATCCCTCCCTCTCTCCTCCGATCACAAGCCGGATCGTCCGGACGAGCTGAACCGGATCCATGAAGCGGGAGGACGGGTTATATACTGGGATGGACCGCGCGTTCTGGGAATGCTTGCGATGTCAAGAGCCATAGGTGACAATTACTTGAAGCCTTACGTGAGCTGCGTGCCGGAGGTGACGATAACGGATCGGACGACGGAGGATGACTGTTTGATACTGGCGAGTGATGGGTTATGGGACGTGGTGTCGAATGAAACGGCATGCGGGGTGGCACGCATGTGCCTGCGCGGAAGAAACCACGCGCCGCCGAGGTCAGAGGTGGCGTTGGAGGGCGAGATGGAAGGAGTAGCGACGGAGATGACGGACAAAGCGTGCTCTGACGCGTCAATGTTGCTGATGAAGCTTGCTTTGGCCAGGCACTCCACTGACAACATCAGCGTGGTGGTGGTGGATCTCAGAGGAGGGCCGGGAAATTAA 1233 0.5588 MADICCRVVSENETSGACQPSSRVARRRRMEIRRFKVVEGEEKRPKLHLASRSLSRNCENAVENCASGIEKALAFLSPNPGKSETHHKQTSGDSFDPAHSPVLVRQCPKFGVASVCGRRRDMEDAVAVHPCFSRGDHQSAGEFHYFGVYDGHGCSHVAAKCKDRLHELVKEELEQQERSTAWEGAMERSFSRMDREVIAWNANVLEANCRCELQSPECDAVGSTAVTAILTADKIIIANCGDSRAVLCRNGKSLPLSSDHKPDRPDELNRIHEAGGRVIYWDGPRVLGMLAMSRAIGDNYLKPYVSCVPEVTITDRTTEDDCLILASDGLWDVVSNETACGVARMCLRGRNHAPPRSEVALEGEMEGVATEMTDKACSDASMLLMKLALARHSTDNISVVVVDLRGGPGN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0055 410 FunFam Protein phosphatase 2C 37 104 408 - -
Lele12g0055 410 SMART PP2C_4 96 402 IPR001932 -
Lele12g0055 410 ProSitePatterns PPM-type phosphatase domain signature. 145 153 IPR000222 GO:0043169
Lele12g0055 410 SUPERFAMILY PP2C-like 106 405 IPR036457 -
Lele12g0055 410 Pfam Protein phosphatase 2C 110 396 IPR001932 -
Lele12g0055 410 CDD PP2Cc 109 404 IPR001932 -
Lele12g0055 410 Gene3D - 104 406 IPR036457 -
Lele12g0055 410 MobiDBLite consensus disorder prediction 77 97 - -
Lele12g0055 410 PANTHER PROTEIN PHOSPHATASE 77 404 - -
Lele12g0055 410 ProSiteProfiles PPM-type phosphatase domain profile. 109 404 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0055 Lele-ChrLele12 531407 533045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0055 1 405 PP2C-type Phosphatase Gene Family AT1G07430 52.620 6.98e-147 422