Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0051 ATGTATGGATTTGCTCCGCCTCTAACTGGAAGCAATTGCCTTTACTGCGCTAAGCTGTGTTTTAGATCCCTCGGACCTTCCTTGCTCCTGCAAAACCTAGCTAATTCTTCCTTACCCAATAGTACATTCAGTTATCGACGTGAGTTTAATCCCCTTCTATTTCAATCGGAATCCGGTTCGCCTTGCTGCTGGAACTATAAGAAGCACACAAGAGGTGGCACTCTTCTGAAAGCTAGCCGTCGGGAGACTCCTTACGAAGTTTTGGGCGTATCTCCATCAGCTACAGCGGATGAAATAAAAAAGGCATACAGAAAACTTGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGACAAGGCACAGGAGAAGTTTATGAGGATAAAACACGCGTACAATACATTGATAAATTCTACTTCGCGCAGAAAATTTGATTCTGCAAATAATGGTTCCGATTCTTATTATTCCTCTCAGAGAAGCCGAAATGGTAATGCAAAAGAAGAAGAATTTTACGGATTAGGTAATTTTTTGAGGGATGTTCAAATGACAATAGGGGAATTTTTCAAAGATCTTCAAGAAGAATTCAGGAACTGGGAAGCAAACTCTACTTCACAAGGAAAGCCGAAGAGCCTATGGGAGGAATTAGCAGAGATAGGAGAAGAATTTGTGGAGTTTCTGGAGAAAGAACTTAATATAGTTGATGCAGAAGTTGATTCGAATGACAGTTATAAAAAGCCTCAGGGAGAAAACCCTTCTCGTACTTCTGCTGGCAGCGGTCCTCAAGATGAAGCTGGGAAGGGGAGCAGCAGCATTAAGGATAACCTTGATGAAATAGAAGCTACTCTTGCTCAGTTAAAAAAGGAATTAGGTTTGTAG 873 0.4124 MYGFAPPLTGSNCLYCAKLCFRSLGPSLLLQNLANSSLPNSTFSYRREFNPLLFQSESGSPCCWNYKKHTRGGTLLKASRRETPYEVLGVSPSATADEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSTSRRKFDSANNGSDSYYSSQRSRNGNAKEEEFYGLGNFLRDVQMTIGEFFKDLQEEFRNWEANSTSQGKPKSLWEELAEIGEEFVEFLEKELNIVDAEVDSNDSYKKPQGENPSRTSAGSGPQDEAGKGSSSIKDNLDEIEATLAQLKKELGL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0051 290 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 47 258 - -
Lele12g0051 290 SUPERFAMILY Chaperone J-domain 59 143 IPR036869 -
Lele12g0051 290 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Lele12g0051 290 Coils Coil 267 287 - -
Lele12g0051 290 MobiDBLite consensus disorder prediction 243 267 - -
Lele12g0051 290 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Lele12g0051 290 CDD DnaJ 83 136 IPR001623 -
Lele12g0051 290 PRINTS DnaJ domain signature 103 118 IPR001623 -
Lele12g0051 290 PRINTS DnaJ domain signature 119 139 IPR001623 -
Lele12g0051 290 PRINTS DnaJ domain signature 85 103 IPR001623 -
Lele12g0051 290 MobiDBLite consensus disorder prediction 236 272 - -
Lele12g0051 290 Pfam DnaJ domain 84 144 IPR001623 -
Lele12g0051 290 SMART dnaj_3 82 139 IPR001623 -
Lele12g0051 290 Gene3D DnaJ domain 80 204 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0051 Lele-ChrLele12 509150 511658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0051 79 145 C2H2 Transcription Factor Family AT1G74250 38.356 1.11e-07 50.8