Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0045 ATGATGACGAGTAACAGGAAAATAGGGGTCGCAATGGATTTCTCAAAGGGAAGCAAGATGGCTCTGAAGTGGGGCATCGACAACCTGCTATACAAGGGTGATACCTTGATCATCATCCACGTCAAGCCTTCGCAAGGCGATGAATCACGAAATCTTCTCTGGTCCACCACTGGTTCTCCTCTGATCCCGATGTTAGAGCTTCGTGATAAGGCGGTGATGAGCCAGTATGAAGTGGAGACCGATAGTGAGGTGTTGGATCTGCTCGACACTGCTTGCAGACAGAAGGAGGTGACGGTGGTGGCAAAGCTATACTGGGGGGATGCAAGAGAGAGAATCACGGAGGCCGTCGGGGATCTGAAGCTTGACGTTTTGGTCATGGGAAGCAGAGGCCTGGGCCTCATTCAGAGGGTTTTGCTGGGGAGTGTGACAAGCTACGTTACCGCAAACGCCACTTGCCCCGTGACAATCGTTAAAGACTGTGCACCTTCTGGCTACTGA 498 0.5201 MMTSNRKIGVAMDFSKGSKMALKWGIDNLLYKGDTLIIIHVKPSQGDESRNLLWSTTGSPLIPMLELRDKAVMSQYEVETDSEVLDLLDTACRQKEVTVVAKLYWGDARERITEAVGDLKLDVLVMGSRGLGLIQRVLLGSVTSYVTANATCPVTIVKDCAPSGY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0045 165 PRINTS Universal stress protein signature 118 130 IPR006015 -
Lele12g0045 165 PRINTS Universal stress protein signature 5 23 IPR006015 -
Lele12g0045 165 PRINTS Universal stress protein signature 136 158 IPR006015 -
Lele12g0045 165 FunFam Universal stress protein family protein 2 161 - -
Lele12g0045 165 PANTHER IMP2'P 2 159 - -
Lele12g0045 165 CDD USP_Like 7 157 - -
Lele12g0045 165 Pfam Universal stress protein family 5 158 IPR006016 -
Lele12g0045 165 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 158 - -
Lele12g0045 165 Gene3D HUPs 1 163 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0045 Lele-ChrLele12 458875 459715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0045 17 136 Plant U-box Gene Family AT5G57035 29.268 3.11e-06 44.3