Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0038 ATGGATGCAATCGGCAATATGGGGTTTGACTATGTTTCCTGTGGACATTATGCAAGTGTTGTCCATCCACATGAAAATCAAATGGATGAGCCTTCTGTTCTGGAACTATCACAAGACATGATCAAGGATCAAACATACTTCATTTCACACCTCTCCCAATCCCAACTGAAGCGACTTGTTTTCCCACTTGGTTGTATTTCCAAGCAGAATATATTTGTTGGACAATTTGGCATTAGTACATTTCCTTCACTATCATGTTCTGTATTGAGGAAGTCTGATAATTGTTACACTAGACTTTTGTCCCCTGCCAACATCATCTGCAGGAAGAAGTCCGCAGACTTGCTGCAAAATTTGATCTGCCAAATAAGGATAGAAGAGATTCACAAGGAATATGCTTCCTGGGCTAGGGCCTACGGTTACCCTGAGGCCCATGGTTTGTTCTCTGGCTATTTCTCTATAGCATCAGTGCAGAAATTGTACGTTGTTGAGAAGGATGTAAAAAACAATGTAATTTTTGTGTCAAGAAATTACATCTCCTTGGACAAAAGAAGGCGCCTATTTCGTGTTGGTTCTTTAAAATGGCTTAGTGGACTACCTCCAAGCCAGACAAACCAGCTCCAGTACAAGGTGGAAAGCTCAAACTTTGATTCCCTTTTTTTTGGTAATGTAAGACATGGTCCAGGCTTCTATAATTGCAGTTTACAATGTGAAGGATATTTAGATGGGGTAAAAGACACTGCAGTAGTCCACTTGAATGAAGATGATCAAGGTCTGGTAGCGGGGCAATTTGCAGCATTGTATGAGGGAAGTACTTGCATGGGCTCTGGCGTGATATTGGAGTCATGGGATGATCCAGGTTTTCCTGTTTGCACAAAAGCTTTAGAAATTGCGAGAATGGAAGATAAATCAAAGCTAGGGAATCCAGTCAAGATCAAAGTAGGAATTTTAGGGAGGTCCATAGATAGATATCGCATTGAAGTCTTCAAGGAAGTGGATGGCATTGAGAGAGATGCTTGTTCTGTTTCCAAAGGACTGTCCTTGGAGCCACCGATAGGAGCCATAGCTGCGGGTAACACGGTAGTCCTGAAGCCTTCAGAGATGGCCCCTGCTTCCTCATCTCTTCTGGCCACTATCCTTGAATCTTACTTGGACAATAACGCTGTTAAAGTATGCCATGGAGGACCCCAAGTTGGCCAACATCTTCTGCGTCAAAAATGGGACAAGATATTTTTCACAGGAAGTGCCCTGGTGGGAAGTATTGTTATGTCTGCAGCTGCACAGCATCTGACACCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCTGCTGTCGATTCCCTTTCCGCTTCTGGGGACACAGGCATAGAGATCGATTATGTGCTTGTGGAAAAGAATTTCGCTTCCGTTTTGGTGGAATCAATGAAGACCCGGATCAAGAAAATGTTTGGAGAAAATCCAAAACAACAGAACTCTGTTGCCAGGATAAATAAACAACAATTCTCGATACTCAAGAATCTTGTGGATGATACAGAAGCCAATAGATCGGTGGTTTTTGGCGGTTCAATGGATGAAGATAGCCTGCAACTATTACTAATACCTCTATTATTTATTGAACTGACAATATTGGTGGATCCTCCACTGGAATCGGCAATCATGACGGAAGAAATCTTCGGCCCTCTGCTCCCAGTTATTACTCTGGAGAAGATCGAAGATAGCATTCAATTCAGAAGAGAATGGCTTTATAACATCTGA 1752 0.4264 MDAIGNMGFDYVSCGHYASVVHPHENQMDEPSVLELSQDMIKDQTYFISHLSQSQLKRLVFPLGCISKQNIFVGQFGISTFPSLSCSVLRKSDNCYTRLLSPANIICRKKSADLLQNLICQIRIEEIHKEYASWARAYGYPEAHGLFSGYFSIASVQKLYVVEKDVKNNVIFVSRNYISLDKRRRLFRVGSLKWLSGLPPSQTNQLQYKVESSNFDSLFFGNVRHGPGFYNCSLQCEGYLDGVKDTAVVHLNEDDQGLVAGQFAALYEGSTCMGSGVILESWDDPGFPVCTKALEIARMEDKSKLGNPVKIKVGILGRSIDRYRIEVFKEVDGIERDACSVSKGLSLEPPIGAIAAGNTVVLKPSEMAPASSSLLATILESYLDNNAVKVCHGGPQVGQHLLRQKWDKIFFTGSALVGSIVMSAAAQHLTPVTLELGGKCPAAVDSLSASGDTGIEIDYVLVEKNFASVLVESMKTRIKKMFGENPKQQNSVARINKQQFSILKNLVDDTEANRSVVFGGSMDEDSLQLLLIPLLFIELTILVDPPLESAIMTEEIFGPLLPVITLEKIEDSIQFRREWLYNI 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0038 583 Pfam Aldehyde dehydrogenase family 352 574 IPR015590 GO:0016491
Lele12g0038 583 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 345 437 IPR016162 GO:0016491
Lele12g0038 583 Pfam Aminomethyltransferase beta-barrel domain 187 278 IPR046885 -
Lele12g0038 583 Pfam tRNA methyl transferase HUP domain 5 71 - -
Lele12g0038 583 Gene3D HUPs 1 81 IPR014729 -
Lele12g0038 583 Gene3D Translation factors 184 284 - -
Lele12g0038 583 PANTHER - 158 313 - -
Lele12g0038 583 SUPERFAMILY ALDH-like 350 577 IPR016161 GO:0016491
Lele12g0038 583 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 438 575 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0038 Lele-ChrLele12 428763 434246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0038 345 573 Aldehyde Dehydrogenase Gene Family AT4G36250 51.004 8.12e-75 244